Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC20.44■□□□□ 0.86
Pcdhb1Q91Y08 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdhb1Q91Y08 AA386476-201ENSMUST00000098781 1665 ntBASIC20.44■□□□□ 0.86
Pcdhb1Q91Y08 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdhb1Q91Y08 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdhb1Q91Y08 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdhb1Q91Y08 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC20.44■□□□□ 0.86
Pcdhb1Q91Y08 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdhb1Q91Y08 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdhb1Q91Y08 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdhb1Q91Y08 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdhb1Q91Y08 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdhb1Q91Y08 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdhb1Q91Y08 AC140930.3-201ENSMUST00000222935 274 ntBASIC20.43■□□□□ 0.86
Pcdhb1Q91Y08 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Pcdhb1Q91Y08 Gm5576-201ENSMUST00000075809 1236 ntBASIC20.43■□□□□ 0.86
Pcdhb1Q91Y08 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdhb1Q91Y08 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdhb1Q91Y08 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdhb1Q91Y08 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC20.43■□□□□ 0.86
Pcdhb1Q91Y08 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdhb1Q91Y08 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdhb1Q91Y08 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdhb1Q91Y08 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdhb1Q91Y08 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Pcdhb1Q91Y08 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdhb1Q91Y08 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Pcdhb1Q91Y08 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC20.42■□□□□ 0.86
Pcdhb1Q91Y08 Gm21956-201ENSMUST00000179946 522 ntBASIC20.42■□□□□ 0.86
Pcdhb1Q91Y08 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC20.42■□□□□ 0.86
Pcdhb1Q91Y08 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdhb1Q91Y08 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdhb1Q91Y08 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC20.42■□□□□ 0.86
Pcdhb1Q91Y08 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdhb1Q91Y08 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC20.42■□□□□ 0.86
Pcdhb1Q91Y08 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Pcdhb1Q91Y08 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdhb1Q91Y08 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdhb1Q91Y08 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdhb1Q91Y08 Golph3-202ENSMUST00000226517 2359 ntBASIC20.41■□□□□ 0.86
Pcdhb1Q91Y08 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdhb1Q91Y08 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC20.4■□□□□ 0.86
Pcdhb1Q91Y08 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Pcdhb1Q91Y08 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pcdhb1Q91Y08 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC20.4■□□□□ 0.86
Pcdhb1Q91Y08 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
Pcdhb1Q91Y08 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Pcdhb1Q91Y08 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Pcdhb1Q91Y08 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Pcdhb1Q91Y08 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC20.39■□□□□ 0.85
Pcdhb1Q91Y08 Gm43034-201ENSMUST00000198678 1364 ntBASIC20.39■□□□□ 0.85
Pcdhb1Q91Y08 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Pcdhb1Q91Y08 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Pcdhb1Q91Y08 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Pcdhb1Q91Y08 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Pcdhb1Q91Y08 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdhb1Q91Y08 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Pcdhb1Q91Y08 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdhb1Q91Y08 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdhb1Q91Y08 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Pcdhb1Q91Y08 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdhb1Q91Y08 Gm43137-201ENSMUST00000198052 594 ntBASIC20.38■□□□□ 0.85
Pcdhb1Q91Y08 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdhb1Q91Y08 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Pcdhb1Q91Y08 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdhb1Q91Y08 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdhb1Q91Y08 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdhb1Q91Y08 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdhb1Q91Y08 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdhb1Q91Y08 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdhb1Q91Y08 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdhb1Q91Y08 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC20.37■□□□□ 0.85
Pcdhb1Q91Y08 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Pcdhb1Q91Y08 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC20.37■□□□□ 0.85
Pcdhb1Q91Y08 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
Pcdhb1Q91Y08 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdhb1Q91Y08 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Pcdhb1Q91Y08 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdhb1Q91Y08 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC20.36■□□□□ 0.85
Pcdhb1Q91Y08 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdhb1Q91Y08 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdhb1Q91Y08 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdhb1Q91Y08 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdhb1Q91Y08 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdhb1Q91Y08 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdhb1Q91Y08 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdhb1Q91Y08 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdhb1Q91Y08 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdhb1Q91Y08 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC20.35■□□□□ 0.85
Pcdhb1Q91Y08 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdhb1Q91Y08 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdhb1Q91Y08 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdhb1Q91Y08 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC20.35■□□□□ 0.85
Pcdhb1Q91Y08 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdhb1Q91Y08 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC20.35■□□□□ 0.85
Pcdhb1Q91Y08 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdhb1Q91Y08 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdhb1Q91Y08 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdhb1Q91Y08 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdhb1Q91Y08 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms