Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC19.46■□□□□ 0.71
Pcdhb4Q91XZ6 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC19.46■□□□□ 0.71
Pcdhb4Q91XZ6 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Pcdhb4Q91XZ6 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC19.46■□□□□ 0.71
Pcdhb4Q91XZ6 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdhb4Q91XZ6 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdhb4Q91XZ6 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Pcdhb4Q91XZ6 Mir6236-201ENSMUST00000184437 123 ntBASIC19.45■□□□□ 0.7
Pcdhb4Q91XZ6 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhb4Q91XZ6 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhb4Q91XZ6 Gm43909-201ENSMUST00000203443 1876 ntBASIC19.45■□□□□ 0.7
Pcdhb4Q91XZ6 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC19.45■□□□□ 0.7
Pcdhb4Q91XZ6 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhb4Q91XZ6 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC19.44■□□□□ 0.7
Pcdhb4Q91XZ6 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC19.44■□□□□ 0.7
Pcdhb4Q91XZ6 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Pcdhb4Q91XZ6 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhb4Q91XZ6 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC19.44■□□□□ 0.7
Pcdhb4Q91XZ6 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhb4Q91XZ6 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhb4Q91XZ6 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdhb4Q91XZ6 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdhb4Q91XZ6 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdhb4Q91XZ6 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdhb4Q91XZ6 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdhb4Q91XZ6 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdhb4Q91XZ6 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhb4Q91XZ6 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhb4Q91XZ6 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhb4Q91XZ6 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
Pcdhb4Q91XZ6 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
Pcdhb4Q91XZ6 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
Pcdhb4Q91XZ6 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhb4Q91XZ6 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
Pcdhb4Q91XZ6 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC19.42■□□□□ 0.7
Pcdhb4Q91XZ6 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhb4Q91XZ6 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
Pcdhb4Q91XZ6 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Pcdhb4Q91XZ6 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhb4Q91XZ6 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhb4Q91XZ6 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhb4Q91XZ6 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhb4Q91XZ6 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
Pcdhb4Q91XZ6 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Pcdhb4Q91XZ6 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC19.41■□□□□ 0.7
Pcdhb4Q91XZ6 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC19.41■□□□□ 0.7
Pcdhb4Q91XZ6 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC19.41■□□□□ 0.7
Pcdhb4Q91XZ6 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhb4Q91XZ6 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhb4Q91XZ6 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhb4Q91XZ6 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.41■□□□□ 0.7
Pcdhb4Q91XZ6 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Pcdhb4Q91XZ6 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhb4Q91XZ6 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhb4Q91XZ6 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhb4Q91XZ6 Krt8-ps-201ENSMUST00000208495 945 ntBASIC19.4■□□□□ 0.7
Pcdhb4Q91XZ6 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC19.4■□□□□ 0.7
Pcdhb4Q91XZ6 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhb4Q91XZ6 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhb4Q91XZ6 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhb4Q91XZ6 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhb4Q91XZ6 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Pcdhb4Q91XZ6 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Pcdhb4Q91XZ6 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhb4Q91XZ6 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhb4Q91XZ6 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhb4Q91XZ6 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhb4Q91XZ6 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhb4Q91XZ6 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC19.38■□□□□ 0.69
Pcdhb4Q91XZ6 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC19.38■□□□□ 0.69
Pcdhb4Q91XZ6 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC19.38■□□□□ 0.69
Pcdhb4Q91XZ6 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Pcdhb4Q91XZ6 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdhb4Q91XZ6 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdhb4Q91XZ6 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdhb4Q91XZ6 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhb4Q91XZ6 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhb4Q91XZ6 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhb4Q91XZ6 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhb4Q91XZ6 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhb4Q91XZ6 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhb4Q91XZ6 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhb4Q91XZ6 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhb4Q91XZ6 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhb4Q91XZ6 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhb4Q91XZ6 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Pcdhb4Q91XZ6 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC19.36■□□□□ 0.69
Pcdhb4Q91XZ6 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Pcdhb4Q91XZ6 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Pcdhb4Q91XZ6 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhb4Q91XZ6 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.36■□□□□ 0.69
Pcdhb4Q91XZ6 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhb4Q91XZ6 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhb4Q91XZ6 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC19.36■□□□□ 0.69
Pcdhb4Q91XZ6 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhb4Q91XZ6 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhb4Q91XZ6 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhb4Q91XZ6 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhb4Q91XZ6 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Pcdhb4Q91XZ6 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms