Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Pcdhb6Q91XZ4 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhb6Q91XZ4 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhb6Q91XZ4 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Pcdhb6Q91XZ4 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhb6Q91XZ4 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC20.22■□□□□ 0.83
Pcdhb6Q91XZ4 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhb6Q91XZ4 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
Pcdhb6Q91XZ4 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhb6Q91XZ4 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhb6Q91XZ4 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhb6Q91XZ4 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhb6Q91XZ4 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhb6Q91XZ4 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Pcdhb6Q91XZ4 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
Pcdhb6Q91XZ4 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdhb6Q91XZ4 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdhb6Q91XZ4 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Pcdhb6Q91XZ4 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC20.21■□□□□ 0.83
Pcdhb6Q91XZ4 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdhb6Q91XZ4 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC20.21■□□□□ 0.83
Pcdhb6Q91XZ4 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdhb6Q91XZ4 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdhb6Q91XZ4 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
Pcdhb6Q91XZ4 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhb6Q91XZ4 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhb6Q91XZ4 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhb6Q91XZ4 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC20.2■□□□□ 0.82
Pcdhb6Q91XZ4 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhb6Q91XZ4 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhb6Q91XZ4 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Pcdhb6Q91XZ4 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Pcdhb6Q91XZ4 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC20.2■□□□□ 0.82
Pcdhb6Q91XZ4 Spcs1-204ENSMUST00000226782 949 ntBASIC20.2■□□□□ 0.82
Pcdhb6Q91XZ4 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhb6Q91XZ4 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Pcdhb6Q91XZ4 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC20.2■□□□□ 0.82
Pcdhb6Q91XZ4 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhb6Q91XZ4 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC20.2■□□□□ 0.82
Pcdhb6Q91XZ4 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhb6Q91XZ4 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhb6Q91XZ4 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhb6Q91XZ4 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhb6Q91XZ4 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhb6Q91XZ4 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhb6Q91XZ4 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC20.19■□□□□ 0.82
Pcdhb6Q91XZ4 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhb6Q91XZ4 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhb6Q91XZ4 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
Pcdhb6Q91XZ4 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhb6Q91XZ4 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhb6Q91XZ4 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhb6Q91XZ4 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhb6Q91XZ4 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.19■□□□□ 0.82
Pcdhb6Q91XZ4 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhb6Q91XZ4 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Pcdhb6Q91XZ4 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhb6Q91XZ4 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdhb6Q91XZ4 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdhb6Q91XZ4 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdhb6Q91XZ4 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC20.18■□□□□ 0.82
Pcdhb6Q91XZ4 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdhb6Q91XZ4 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdhb6Q91XZ4 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdhb6Q91XZ4 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdhb6Q91XZ4 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdhb6Q91XZ4 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdhb6Q91XZ4 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC20.18■□□□□ 0.82
Pcdhb6Q91XZ4 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdhb6Q91XZ4 Golph3-202ENSMUST00000226517 2359 ntBASIC20.18■□□□□ 0.82
Pcdhb6Q91XZ4 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdhb6Q91XZ4 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC20.18■□□□□ 0.82
Pcdhb6Q91XZ4 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdhb6Q91XZ4 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdhb6Q91XZ4 Gm12251-201ENSMUST00000117893 792 ntBASIC20.17■□□□□ 0.82
Pcdhb6Q91XZ4 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC20.17■□□□□ 0.82
Pcdhb6Q91XZ4 AC154266.1-201ENSMUST00000223190 503 ntBASIC20.17■□□□□ 0.82
Pcdhb6Q91XZ4 Serp2-204ENSMUST00000228055 705 ntBASIC20.17■□□□□ 0.82
Pcdhb6Q91XZ4 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Pcdhb6Q91XZ4 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdhb6Q91XZ4 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdhb6Q91XZ4 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdhb6Q91XZ4 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC20.16■□□□□ 0.82
Pcdhb6Q91XZ4 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdhb6Q91XZ4 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdhb6Q91XZ4 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdhb6Q91XZ4 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdhb6Q91XZ4 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC20.15■□□□□ 0.82
Pcdhb6Q91XZ4 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Pcdhb6Q91XZ4 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdhb6Q91XZ4 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Pcdhb6Q91XZ4 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdhb6Q91XZ4 Gm20100-201ENSMUST00000209418 2272 ntBASIC20.15■□□□□ 0.82
Pcdhb6Q91XZ4 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Pcdhb6Q91XZ4 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pcdhb6Q91XZ4 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC20.14■□□□□ 0.81
Pcdhb6Q91XZ4 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pcdhb6Q91XZ4 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Pcdhb6Q91XZ4 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Pcdhb6Q91XZ4 Gm7160-202ENSMUST00000188519 1027 ntBASIC20.14■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms