Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhga3Q91XY5 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Pcdhga3Q91XY5 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhga3Q91XY5 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhga3Q91XY5 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhga3Q91XY5 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC17.39■□□□□ 0.37
Pcdhga3Q91XY5 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhga3Q91XY5 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhga3Q91XY5 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhga3Q91XY5 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC17.39■□□□□ 0.37
Pcdhga3Q91XY5 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhga3Q91XY5 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhga3Q91XY5 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhga3Q91XY5 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhga3Q91XY5 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhga3Q91XY5 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Pcdhga3Q91XY5 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
Pcdhga3Q91XY5 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhga3Q91XY5 Gm43182-201ENSMUST00000199476 2528 ntBASIC17.38■□□□□ 0.37
Pcdhga3Q91XY5 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhga3Q91XY5 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhga3Q91XY5 Gm43759-201ENSMUST00000196925 1261 ntBASIC17.38■□□□□ 0.37
Pcdhga3Q91XY5 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhga3Q91XY5 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhga3Q91XY5 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhga3Q91XY5 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhga3Q91XY5 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhga3Q91XY5 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhga3Q91XY5 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhga3Q91XY5 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Pcdhga3Q91XY5 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhga3Q91XY5 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhga3Q91XY5 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhga3Q91XY5 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Pcdhga3Q91XY5 Gm8770-201ENSMUST00000121113 1109 ntBASIC17.37■□□□□ 0.37
Pcdhga3Q91XY5 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhga3Q91XY5 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhga3Q91XY5 Gm9847-201ENSMUST00000052528 599 ntBASIC17.37■□□□□ 0.37
Pcdhga3Q91XY5 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhga3Q91XY5 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC17.37■□□□□ 0.37
Pcdhga3Q91XY5 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Pcdhga3Q91XY5 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhga3Q91XY5 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhga3Q91XY5 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhga3Q91XY5 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Pcdhga3Q91XY5 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC17.36■□□□□ 0.37
Pcdhga3Q91XY5 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhga3Q91XY5 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhga3Q91XY5 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhga3Q91XY5 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhga3Q91XY5 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Pcdhga3Q91XY5 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhga3Q91XY5 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhga3Q91XY5 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhga3Q91XY5 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
Pcdhga3Q91XY5 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
Pcdhga3Q91XY5 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC17.36■□□□□ 0.37
Pcdhga3Q91XY5 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC17.35■□□□□ 0.37
Pcdhga3Q91XY5 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhga3Q91XY5 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhga3Q91XY5 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Pcdhga3Q91XY5 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhga3Q91XY5 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhga3Q91XY5 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhga3Q91XY5 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhga3Q91XY5 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhga3Q91XY5 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Pcdhga3Q91XY5 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhga3Q91XY5 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhga3Q91XY5 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
Pcdhga3Q91XY5 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhga3Q91XY5 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhga3Q91XY5 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhga3Q91XY5 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhga3Q91XY5 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhga3Q91XY5 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhga3Q91XY5 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhga3Q91XY5 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhga3Q91XY5 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhga3Q91XY5 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Pcdhga3Q91XY5 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhga3Q91XY5 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhga3Q91XY5 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhga3Q91XY5 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pcdhga3Q91XY5 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pcdhga3Q91XY5 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pcdhga3Q91XY5 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Pcdhga3Q91XY5 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pcdhga3Q91XY5 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Pcdhga3Q91XY5 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pcdhga3Q91XY5 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Pcdhga3Q91XY5 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
Pcdhga3Q91XY5 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
Pcdhga3Q91XY5 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhga3Q91XY5 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhga3Q91XY5 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhga3Q91XY5 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Pcdhga3Q91XY5 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhga3Q91XY5 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhga3Q91XY5 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms