Protein–RNA interactions for Protein: Q91XX8

Pcdhgb1, Protocadherin gamma B1, mousemouse

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb1Q91XX8 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC20.41■□□□□ 0.86
Pcdhgb1Q91XX8 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdhgb1Q91XX8 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdhgb1Q91XX8 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Pcdhgb1Q91XX8 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pcdhgb1Q91XX8 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Pcdhgb1Q91XX8 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Pcdhgb1Q91XX8 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC20.4■□□□□ 0.86
Pcdhgb1Q91XX8 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Pcdhgb1Q91XX8 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pcdhgb1Q91XX8 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pcdhgb1Q91XX8 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pcdhgb1Q91XX8 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pcdhgb1Q91XX8 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Pcdhgb1Q91XX8 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Pcdhgb1Q91XX8 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Pcdhgb1Q91XX8 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Pcdhgb1Q91XX8 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Pcdhgb1Q91XX8 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Pcdhgb1Q91XX8 Gm26571-201ENSMUST00000181399 666 ntBASIC20.39■□□□□ 0.85
Pcdhgb1Q91XX8 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Pcdhgb1Q91XX8 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
Pcdhgb1Q91XX8 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Pcdhgb1Q91XX8 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdhgb1Q91XX8 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Pcdhgb1Q91XX8 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdhgb1Q91XX8 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC20.38■□□□□ 0.85
Pcdhgb1Q91XX8 Gm10129-202ENSMUST00000193100 1316 ntBASIC20.38■□□□□ 0.85
Pcdhgb1Q91XX8 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdhgb1Q91XX8 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdhgb1Q91XX8 AC099934.2-201ENSMUST00000196389 70 ntBASIC20.38■□□□□ 0.85
Pcdhgb1Q91XX8 AC156953.1-201ENSMUST00000196953 70 ntBASIC20.38■□□□□ 0.85
Pcdhgb1Q91XX8 AC157822.2-201ENSMUST00000200291 70 ntBASIC20.38■□□□□ 0.85
Pcdhgb1Q91XX8 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdhgb1Q91XX8 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Pcdhgb1Q91XX8 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC20.38■□□□□ 0.85
Pcdhgb1Q91XX8 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Pcdhgb1Q91XX8 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdhgb1Q91XX8 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdhgb1Q91XX8 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdhgb1Q91XX8 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC20.37■□□□□ 0.85
Pcdhgb1Q91XX8 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC20.37■□□□□ 0.85
Pcdhgb1Q91XX8 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdhgb1Q91XX8 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC20.37■□□□□ 0.85
Pcdhgb1Q91XX8 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC20.37■□□□□ 0.85
Pcdhgb1Q91XX8 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdhgb1Q91XX8 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdhgb1Q91XX8 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Pcdhgb1Q91XX8 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.37■□□□□ 0.85
Pcdhgb1Q91XX8 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdhgb1Q91XX8 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Pcdhgb1Q91XX8 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdhgb1Q91XX8 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Pcdhgb1Q91XX8 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdhgb1Q91XX8 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC20.36■□□□□ 0.85
Pcdhgb1Q91XX8 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Pcdhgb1Q91XX8 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdhgb1Q91XX8 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Pcdhgb1Q91XX8 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdhgb1Q91XX8 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdhgb1Q91XX8 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdhgb1Q91XX8 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdhgb1Q91XX8 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdhgb1Q91XX8 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Pcdhgb1Q91XX8 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdhgb1Q91XX8 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdhgb1Q91XX8 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Pcdhgb1Q91XX8 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdhgb1Q91XX8 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdhgb1Q91XX8 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdhgb1Q91XX8 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
Pcdhgb1Q91XX8 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdhgb1Q91XX8 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdhgb1Q91XX8 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
Pcdhgb1Q91XX8 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC20.35■□□□□ 0.85
Pcdhgb1Q91XX8 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdhgb1Q91XX8 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC20.35■□□□□ 0.85
Pcdhgb1Q91XX8 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC20.35■□□□□ 0.85
Pcdhgb1Q91XX8 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdhgb1Q91XX8 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdhgb1Q91XX8 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdhgb1Q91XX8 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdhgb1Q91XX8 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdhgb1Q91XX8 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Pcdhgb1Q91XX8 Gm42642-201ENSMUST00000200683 355 ntBASIC20.34■□□□□ 0.85
Pcdhgb1Q91XX8 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdhgb1Q91XX8 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Pcdhgb1Q91XX8 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdhgb1Q91XX8 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdhgb1Q91XX8 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdhgb1Q91XX8 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pcdhgb1Q91XX8 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pcdhgb1Q91XX8 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pcdhgb1Q91XX8 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pcdhgb1Q91XX8 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pcdhgb1Q91XX8 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pcdhgb1Q91XX8 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Pcdhgb1Q91XX8 AC164629.5-201ENSMUST00000220387 632 ntBASIC20.33■□□□□ 0.85
Pcdhgb1Q91XX8 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pcdhgb1Q91XX8 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms