Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Trex1Q91XB0 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Trex1Q91XB0 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC22.66■■□□□ 1.22
Trex1Q91XB0 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
Trex1Q91XB0 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC22.65■■□□□ 1.22
Trex1Q91XB0 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Trex1Q91XB0 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Trex1Q91XB0 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Trex1Q91XB0 Gm12933-201ENSMUST00000120203 872 ntBASIC22.65■■□□□ 1.22
Trex1Q91XB0 Gm27011-201ENSMUST00000182352 972 ntBASIC22.65■■□□□ 1.22
Trex1Q91XB0 CT030146.1-201ENSMUST00000220919 217 ntBASIC22.65■■□□□ 1.22
Trex1Q91XB0 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
Trex1Q91XB0 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Trex1Q91XB0 Snhg20-203ENSMUST00000182811 2153 ntBASIC22.65■■□□□ 1.22
Trex1Q91XB0 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Trex1Q91XB0 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.22
Trex1Q91XB0 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Trex1Q91XB0 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Trex1Q91XB0 Gm37035-201ENSMUST00000194809 2148 ntBASIC22.64■■□□□ 1.21
Trex1Q91XB0 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Trex1Q91XB0 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Trex1Q91XB0 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Trex1Q91XB0 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Trex1Q91XB0 AC112142.1-201ENSMUST00000228796 918 ntBASIC22.63■■□□□ 1.21
Trex1Q91XB0 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Trex1Q91XB0 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
Trex1Q91XB0 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Trex1Q91XB0 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
Trex1Q91XB0 Cdkn3-203ENSMUST00000227149 1952 ntBASIC22.62■■□□□ 1.21
Trex1Q91XB0 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Trex1Q91XB0 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC22.62■■□□□ 1.21
Trex1Q91XB0 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Trex1Q91XB0 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Trex1Q91XB0 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC22.62■■□□□ 1.21
Trex1Q91XB0 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Trex1Q91XB0 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC22.62■■□□□ 1.21
Trex1Q91XB0 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC22.62■■□□□ 1.21
Trex1Q91XB0 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC22.61■■□□□ 1.21
Trex1Q91XB0 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Trex1Q91XB0 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Trex1Q91XB0 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC22.61■■□□□ 1.21
Trex1Q91XB0 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC22.61■■□□□ 1.21
Trex1Q91XB0 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
Trex1Q91XB0 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC22.61■■□□□ 1.21
Trex1Q91XB0 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC22.61■■□□□ 1.21
Trex1Q91XB0 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC22.61■■□□□ 1.21
Trex1Q91XB0 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Trex1Q91XB0 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC22.6■■□□□ 1.21
Trex1Q91XB0 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Trex1Q91XB0 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Trex1Q91XB0 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Trex1Q91XB0 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Trex1Q91XB0 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Trex1Q91XB0 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Trex1Q91XB0 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC22.6■■□□□ 1.21
Trex1Q91XB0 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Trex1Q91XB0 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
Trex1Q91XB0 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC22.6■■□□□ 1.21
Trex1Q91XB0 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Trex1Q91XB0 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Trex1Q91XB0 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Trex1Q91XB0 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Trex1Q91XB0 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
Trex1Q91XB0 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
Trex1Q91XB0 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC22.59■■□□□ 1.21
Trex1Q91XB0 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
Trex1Q91XB0 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC22.59■■□□□ 1.21
Trex1Q91XB0 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
Trex1Q91XB0 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Trex1Q91XB0 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Trex1Q91XB0 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Trex1Q91XB0 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.21
Trex1Q91XB0 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC22.58■■□□□ 1.21
Trex1Q91XB0 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC22.58■■□□□ 1.21
Trex1Q91XB0 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Trex1Q91XB0 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Trex1Q91XB0 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Trex1Q91XB0 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Trex1Q91XB0 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC22.58■■□□□ 1.21
Trex1Q91XB0 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
Trex1Q91XB0 AA386476-201ENSMUST00000098781 1665 ntBASIC22.58■■□□□ 1.2
Trex1Q91XB0 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Trex1Q91XB0 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.2
Trex1Q91XB0 Gm15043-201ENSMUST00000118843 1543 ntBASIC22.57■■□□□ 1.2
Trex1Q91XB0 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Trex1Q91XB0 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
Trex1Q91XB0 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC22.57■■□□□ 1.2
Trex1Q91XB0 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Trex1Q91XB0 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Trex1Q91XB0 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Trex1Q91XB0 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Trex1Q91XB0 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
Trex1Q91XB0 AC154266.1-201ENSMUST00000223190 503 ntBASIC22.56■■□□□ 1.2
Trex1Q91XB0 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
Trex1Q91XB0 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
Trex1Q91XB0 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Trex1Q91XB0 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Trex1Q91XB0 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Trex1Q91XB0 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Trex1Q91XB0 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms