Protein–RNA interactions for Protein: Q91VH2

Snx9, Sorting nexin-9, mousemouse

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx9Q91VH2 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Snx9Q91VH2 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Snx9Q91VH2 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Snx9Q91VH2 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Snx9Q91VH2 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Snx9Q91VH2 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Snx9Q91VH2 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Snx9Q91VH2 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Snx9Q91VH2 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Snx9Q91VH2 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Snx9Q91VH2 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC20.64■□□□□ 0.89
Snx9Q91VH2 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC20.64■□□□□ 0.89
Snx9Q91VH2 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Snx9Q91VH2 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Snx9Q91VH2 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Snx9Q91VH2 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Snx9Q91VH2 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
Snx9Q91VH2 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Snx9Q91VH2 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Snx9Q91VH2 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Snx9Q91VH2 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.63■□□□□ 0.89
Snx9Q91VH2 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Snx9Q91VH2 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Snx9Q91VH2 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Snx9Q91VH2 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
Snx9Q91VH2 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Snx9Q91VH2 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Snx9Q91VH2 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC20.63■□□□□ 0.89
Snx9Q91VH2 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Snx9Q91VH2 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
Snx9Q91VH2 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Snx9Q91VH2 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Snx9Q91VH2 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC20.62■□□□□ 0.89
Snx9Q91VH2 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Snx9Q91VH2 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Snx9Q91VH2 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Snx9Q91VH2 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Snx9Q91VH2 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC20.62■□□□□ 0.89
Snx9Q91VH2 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
Snx9Q91VH2 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC20.62■□□□□ 0.89
Snx9Q91VH2 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Snx9Q91VH2 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Snx9Q91VH2 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Snx9Q91VH2 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Snx9Q91VH2 Cdkn3-203ENSMUST00000227149 1952 ntBASIC20.61■□□□□ 0.89
Snx9Q91VH2 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Snx9Q91VH2 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Snx9Q91VH2 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Snx9Q91VH2 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Snx9Q91VH2 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Snx9Q91VH2 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC20.61■□□□□ 0.89
Snx9Q91VH2 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Snx9Q91VH2 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
Snx9Q91VH2 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.61■□□□□ 0.89
Snx9Q91VH2 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC20.61■□□□□ 0.89
Snx9Q91VH2 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Snx9Q91VH2 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Snx9Q91VH2 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Snx9Q91VH2 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Snx9Q91VH2 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Snx9Q91VH2 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Snx9Q91VH2 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Snx9Q91VH2 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Snx9Q91VH2 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Snx9Q91VH2 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Snx9Q91VH2 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Snx9Q91VH2 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC20.59■□□□□ 0.89
Snx9Q91VH2 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC20.59■□□□□ 0.89
Snx9Q91VH2 AC137127.1-201ENSMUST00000213466 1078 ntBASIC20.59■□□□□ 0.89
Snx9Q91VH2 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Snx9Q91VH2 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Snx9Q91VH2 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Snx9Q91VH2 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Snx9Q91VH2 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Snx9Q91VH2 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Snx9Q91VH2 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Snx9Q91VH2 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Snx9Q91VH2 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Snx9Q91VH2 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Snx9Q91VH2 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC20.58■□□□□ 0.89
Snx9Q91VH2 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Snx9Q91VH2 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Snx9Q91VH2 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Snx9Q91VH2 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC20.58■□□□□ 0.89
Snx9Q91VH2 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC20.58■□□□□ 0.89
Snx9Q91VH2 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Snx9Q91VH2 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Snx9Q91VH2 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Snx9Q91VH2 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Snx9Q91VH2 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Snx9Q91VH2 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Snx9Q91VH2 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Snx9Q91VH2 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Snx9Q91VH2 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Snx9Q91VH2 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Snx9Q91VH2 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Snx9Q91VH2 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Snx9Q91VH2 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Snx9Q91VH2 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Snx9Q91VH2 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms