Protein–RNA interactions for Protein: Q8VIK1

Snrnp25, U11/U12 small nuclear ribonucleoprotein 25 kDa protein, mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp25Q8VIK1 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC20.67■□□□□ 0.9
Snrnp25Q8VIK1 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Snrnp25Q8VIK1 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Snrnp25Q8VIK1 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC20.66■□□□□ 0.9
Snrnp25Q8VIK1 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC20.66■□□□□ 0.9
Snrnp25Q8VIK1 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Snrnp25Q8VIK1 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Snrnp25Q8VIK1 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Snrnp25Q8VIK1 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Snrnp25Q8VIK1 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Snrnp25Q8VIK1 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Snrnp25Q8VIK1 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
Snrnp25Q8VIK1 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Snrnp25Q8VIK1 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Snrnp25Q8VIK1 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC20.65■□□□□ 0.9
Snrnp25Q8VIK1 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Snrnp25Q8VIK1 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Snrnp25Q8VIK1 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Snrnp25Q8VIK1 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Snrnp25Q8VIK1 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Snrnp25Q8VIK1 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Snrnp25Q8VIK1 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Snrnp25Q8VIK1 Serp2-204ENSMUST00000228055 705 ntBASIC20.65■□□□□ 0.9
Snrnp25Q8VIK1 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Snrnp25Q8VIK1 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Snrnp25Q8VIK1 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Snrnp25Q8VIK1 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Snrnp25Q8VIK1 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Snrnp25Q8VIK1 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Snrnp25Q8VIK1 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Snrnp25Q8VIK1 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Snrnp25Q8VIK1 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Snrnp25Q8VIK1 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC20.64■□□□□ 0.89
Snrnp25Q8VIK1 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Snrnp25Q8VIK1 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC20.64■□□□□ 0.89
Snrnp25Q8VIK1 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
Snrnp25Q8VIK1 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Snrnp25Q8VIK1 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
Snrnp25Q8VIK1 Gm2011-201ENSMUST00000203124 1263 ntBASIC20.63■□□□□ 0.89
Snrnp25Q8VIK1 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Snrnp25Q8VIK1 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Snrnp25Q8VIK1 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Snrnp25Q8VIK1 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Snrnp25Q8VIK1 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Snrnp25Q8VIK1 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Snrnp25Q8VIK1 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Snrnp25Q8VIK1 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Snrnp25Q8VIK1 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Snrnp25Q8VIK1 AA386476-201ENSMUST00000098781 1665 ntBASIC20.62■□□□□ 0.89
Snrnp25Q8VIK1 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Snrnp25Q8VIK1 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
Snrnp25Q8VIK1 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Snrnp25Q8VIK1 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Snrnp25Q8VIK1 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Snrnp25Q8VIK1 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Snrnp25Q8VIK1 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Snrnp25Q8VIK1 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Snrnp25Q8VIK1 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Snrnp25Q8VIK1 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Snrnp25Q8VIK1 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Snrnp25Q8VIK1 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Snrnp25Q8VIK1 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Snrnp25Q8VIK1 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Snrnp25Q8VIK1 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Snrnp25Q8VIK1 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Snrnp25Q8VIK1 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Snrnp25Q8VIK1 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Snrnp25Q8VIK1 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Snrnp25Q8VIK1 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Snrnp25Q8VIK1 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Snrnp25Q8VIK1 Gm26833-201ENSMUST00000180899 440 ntBASIC20.6■□□□□ 0.89
Snrnp25Q8VIK1 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Snrnp25Q8VIK1 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Snrnp25Q8VIK1 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Snrnp25Q8VIK1 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.6■□□□□ 0.89
Snrnp25Q8VIK1 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Snrnp25Q8VIK1 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC20.59■□□□□ 0.89
Snrnp25Q8VIK1 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC20.59■□□□□ 0.89
Snrnp25Q8VIK1 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC20.59■□□□□ 0.89
Snrnp25Q8VIK1 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Snrnp25Q8VIK1 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
Snrnp25Q8VIK1 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Snrnp25Q8VIK1 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Snrnp25Q8VIK1 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Snrnp25Q8VIK1 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC20.59■□□□□ 0.89
Snrnp25Q8VIK1 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Snrnp25Q8VIK1 Gm34220-201ENSMUST00000223001 2709 ntBASIC20.58■□□□□ 0.89
Snrnp25Q8VIK1 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Snrnp25Q8VIK1 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Snrnp25Q8VIK1 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Snrnp25Q8VIK1 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Snrnp25Q8VIK1 Gm21168-201ENSMUST00000199646 1096 ntBASIC20.58■□□□□ 0.89
Snrnp25Q8VIK1 Gm40848-201ENSMUST00000221998 324 ntBASIC20.58■□□□□ 0.89
Snrnp25Q8VIK1 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Snrnp25Q8VIK1 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Snrnp25Q8VIK1 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Snrnp25Q8VIK1 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Snrnp25Q8VIK1 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Snrnp25Q8VIK1 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Snrnp25Q8VIK1 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms