Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
TraipQ8VIG6 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TraipQ8VIG6 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TraipQ8VIG6 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TraipQ8VIG6 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TraipQ8VIG6 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TraipQ8VIG6 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TraipQ8VIG6 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC20.98■□□□□ 0.95
TraipQ8VIG6 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TraipQ8VIG6 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
TraipQ8VIG6 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TraipQ8VIG6 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TraipQ8VIG6 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TraipQ8VIG6 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.97■□□□□ 0.95
TraipQ8VIG6 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
TraipQ8VIG6 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC20.96■□□□□ 0.95
TraipQ8VIG6 Reep4-203ENSMUST00000226563 1444 ntBASIC20.96■□□□□ 0.95
TraipQ8VIG6 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
TraipQ8VIG6 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
TraipQ8VIG6 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TraipQ8VIG6 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC20.96■□□□□ 0.95
TraipQ8VIG6 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TraipQ8VIG6 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TraipQ8VIG6 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
TraipQ8VIG6 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC20.96■□□□□ 0.95
TraipQ8VIG6 Gm37035-201ENSMUST00000194809 2148 ntBASIC20.96■□□□□ 0.95
TraipQ8VIG6 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
TraipQ8VIG6 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
TraipQ8VIG6 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TraipQ8VIG6 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
TraipQ8VIG6 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TraipQ8VIG6 Gm42911-201ENSMUST00000199360 1630 ntBASIC20.95■□□□□ 0.94
TraipQ8VIG6 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC20.95■□□□□ 0.94
TraipQ8VIG6 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TraipQ8VIG6 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TraipQ8VIG6 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
TraipQ8VIG6 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TraipQ8VIG6 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TraipQ8VIG6 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC20.94■□□□□ 0.94
TraipQ8VIG6 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC20.94■□□□□ 0.94
TraipQ8VIG6 CT030146.1-201ENSMUST00000220919 217 ntBASIC20.94■□□□□ 0.94
TraipQ8VIG6 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
TraipQ8VIG6 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.94■□□□□ 0.94
TraipQ8VIG6 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TraipQ8VIG6 Cdkn3-203ENSMUST00000227149 1952 ntBASIC20.94■□□□□ 0.94
TraipQ8VIG6 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TraipQ8VIG6 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TraipQ8VIG6 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TraipQ8VIG6 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC20.93■□□□□ 0.94
TraipQ8VIG6 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
TraipQ8VIG6 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TraipQ8VIG6 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TraipQ8VIG6 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TraipQ8VIG6 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TraipQ8VIG6 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TraipQ8VIG6 Gm13146-201ENSMUST00000118508 780 ntBASIC20.92■□□□□ 0.94
TraipQ8VIG6 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TraipQ8VIG6 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC20.92■□□□□ 0.94
TraipQ8VIG6 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TraipQ8VIG6 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC20.92■□□□□ 0.94
TraipQ8VIG6 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
TraipQ8VIG6 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
TraipQ8VIG6 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC20.91■□□□□ 0.94
TraipQ8VIG6 Gm5297-201ENSMUST00000198555 1171 ntBASIC20.91■□□□□ 0.94
TraipQ8VIG6 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
TraipQ8VIG6 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TraipQ8VIG6 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
TraipQ8VIG6 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TraipQ8VIG6 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
TraipQ8VIG6 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TraipQ8VIG6 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TraipQ8VIG6 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TraipQ8VIG6 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC20.9■□□□□ 0.94
TraipQ8VIG6 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC20.9■□□□□ 0.94
TraipQ8VIG6 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
TraipQ8VIG6 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TraipQ8VIG6 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TraipQ8VIG6 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TraipQ8VIG6 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
TraipQ8VIG6 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC20.89■□□□□ 0.94
TraipQ8VIG6 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
TraipQ8VIG6 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TraipQ8VIG6 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TraipQ8VIG6 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
TraipQ8VIG6 Gm12933-201ENSMUST00000120203 872 ntBASIC20.89■□□□□ 0.93
TraipQ8VIG6 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC20.89■□□□□ 0.93
TraipQ8VIG6 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TraipQ8VIG6 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TraipQ8VIG6 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.88■□□□□ 0.93
TraipQ8VIG6 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TraipQ8VIG6 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TraipQ8VIG6 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC20.88■□□□□ 0.93
TraipQ8VIG6 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC20.88■□□□□ 0.93
TraipQ8VIG6 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
TraipQ8VIG6 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
TraipQ8VIG6 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC20.88■□□□□ 0.93
TraipQ8VIG6 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TraipQ8VIG6 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TraipQ8VIG6 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
TraipQ8VIG6 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms