Protein–RNA interactions for Protein: Q8VI88

Odf4, Outer dense fiber protein 4, mousemouse

Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Odf4Q8VI88 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Odf4Q8VI88 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Odf4Q8VI88 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Odf4Q8VI88 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Odf4Q8VI88 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Odf4Q8VI88 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Odf4Q8VI88 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Odf4Q8VI88 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Odf4Q8VI88 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Odf4Q8VI88 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Odf4Q8VI88 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC17.4■□□□□ 0.38
Odf4Q8VI88 Gm43403-201ENSMUST00000198011 1786 ntBASIC17.4■□□□□ 0.38
Odf4Q8VI88 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Odf4Q8VI88 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Odf4Q8VI88 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Odf4Q8VI88 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Odf4Q8VI88 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Odf4Q8VI88 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC17.39■□□□□ 0.37
Odf4Q8VI88 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Odf4Q8VI88 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Odf4Q8VI88 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC17.39■□□□□ 0.37
Odf4Q8VI88 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Odf4Q8VI88 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Odf4Q8VI88 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC17.39■□□□□ 0.37
Odf4Q8VI88 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Odf4Q8VI88 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Odf4Q8VI88 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Odf4Q8VI88 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC17.39■□□□□ 0.37
Odf4Q8VI88 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC17.38■□□□□ 0.37
Odf4Q8VI88 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Odf4Q8VI88 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Odf4Q8VI88 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Odf4Q8VI88 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Odf4Q8VI88 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Odf4Q8VI88 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
Odf4Q8VI88 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
Odf4Q8VI88 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Odf4Q8VI88 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Odf4Q8VI88 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Odf4Q8VI88 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Odf4Q8VI88 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Odf4Q8VI88 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Odf4Q8VI88 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Odf4Q8VI88 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Odf4Q8VI88 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC17.37■□□□□ 0.37
Odf4Q8VI88 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Odf4Q8VI88 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Odf4Q8VI88 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Odf4Q8VI88 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Odf4Q8VI88 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Odf4Q8VI88 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Odf4Q8VI88 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
Odf4Q8VI88 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Odf4Q8VI88 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Odf4Q8VI88 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC17.36■□□□□ 0.37
Odf4Q8VI88 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Odf4Q8VI88 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Odf4Q8VI88 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Odf4Q8VI88 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Odf4Q8VI88 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Odf4Q8VI88 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Odf4Q8VI88 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Odf4Q8VI88 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC17.35■□□□□ 0.37
Odf4Q8VI88 Gm43137-201ENSMUST00000198052 594 ntBASIC17.35■□□□□ 0.37
Odf4Q8VI88 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Odf4Q8VI88 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Odf4Q8VI88 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Odf4Q8VI88 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Odf4Q8VI88 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Odf4Q8VI88 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Odf4Q8VI88 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Odf4Q8VI88 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Odf4Q8VI88 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Odf4Q8VI88 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Odf4Q8VI88 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC17.34■□□□□ 0.37
Odf4Q8VI88 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Odf4Q8VI88 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Odf4Q8VI88 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Odf4Q8VI88 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Odf4Q8VI88 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Odf4Q8VI88 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Odf4Q8VI88 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Odf4Q8VI88 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Odf4Q8VI88 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Odf4Q8VI88 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Odf4Q8VI88 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Odf4Q8VI88 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Odf4Q8VI88 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Odf4Q8VI88 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Odf4Q8VI88 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Odf4Q8VI88 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC17.33■□□□□ 0.37
Odf4Q8VI88 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Odf4Q8VI88 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Odf4Q8VI88 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC17.33■□□□□ 0.36
Odf4Q8VI88 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC17.33■□□□□ 0.36
Odf4Q8VI88 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Odf4Q8VI88 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Odf4Q8VI88 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Odf4Q8VI88 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Odf4Q8VI88 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms