Protein–RNA interactions for Protein: Q8VHP6

Cdhr1, Cadherin-related family member 1, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr1Q8VHP6 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Cdhr1Q8VHP6 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Cdhr1Q8VHP6 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Cdhr1Q8VHP6 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Cdhr1Q8VHP6 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Cdhr1Q8VHP6 Gm10571-201ENSMUST00000097869 1638 ntBASIC19.17■□□□□ 0.66
Cdhr1Q8VHP6 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC19.17■□□□□ 0.66
Cdhr1Q8VHP6 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cdhr1Q8VHP6 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cdhr1Q8VHP6 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Cdhr1Q8VHP6 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cdhr1Q8VHP6 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cdhr1Q8VHP6 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC19.16■□□□□ 0.66
Cdhr1Q8VHP6 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Cdhr1Q8VHP6 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cdhr1Q8VHP6 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cdhr1Q8VHP6 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cdhr1Q8VHP6 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cdhr1Q8VHP6 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Cdhr1Q8VHP6 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cdhr1Q8VHP6 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cdhr1Q8VHP6 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cdhr1Q8VHP6 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC19.15■□□□□ 0.66
Cdhr1Q8VHP6 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cdhr1Q8VHP6 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cdhr1Q8VHP6 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cdhr1Q8VHP6 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
Cdhr1Q8VHP6 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC19.15■□□□□ 0.66
Cdhr1Q8VHP6 Gm27801-201ENSMUST00000184174 223 ntBASIC19.15■□□□□ 0.66
Cdhr1Q8VHP6 Gm37179-201ENSMUST00000194862 823 ntBASIC19.15■□□□□ 0.66
Cdhr1Q8VHP6 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Cdhr1Q8VHP6 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Cdhr1Q8VHP6 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Cdhr1Q8VHP6 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cdhr1Q8VHP6 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Cdhr1Q8VHP6 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Cdhr1Q8VHP6 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cdhr1Q8VHP6 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Cdhr1Q8VHP6 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Cdhr1Q8VHP6 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC19.14■□□□□ 0.65
Cdhr1Q8VHP6 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Cdhr1Q8VHP6 Gm14281-201ENSMUST00000121700 1294 ntBASIC19.14■□□□□ 0.65
Cdhr1Q8VHP6 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Cdhr1Q8VHP6 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cdhr1Q8VHP6 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cdhr1Q8VHP6 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cdhr1Q8VHP6 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Cdhr1Q8VHP6 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cdhr1Q8VHP6 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.65
Cdhr1Q8VHP6 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cdhr1Q8VHP6 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Cdhr1Q8VHP6 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cdhr1Q8VHP6 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cdhr1Q8VHP6 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC19.13■□□□□ 0.65
Cdhr1Q8VHP6 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cdhr1Q8VHP6 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Cdhr1Q8VHP6 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Cdhr1Q8VHP6 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cdhr1Q8VHP6 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cdhr1Q8VHP6 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cdhr1Q8VHP6 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC19.12■□□□□ 0.65
Cdhr1Q8VHP6 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
Cdhr1Q8VHP6 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cdhr1Q8VHP6 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cdhr1Q8VHP6 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cdhr1Q8VHP6 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Cdhr1Q8VHP6 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
Cdhr1Q8VHP6 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cdhr1Q8VHP6 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Cdhr1Q8VHP6 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Cdhr1Q8VHP6 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Cdhr1Q8VHP6 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cdhr1Q8VHP6 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC19.12■□□□□ 0.65
Cdhr1Q8VHP6 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cdhr1Q8VHP6 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC19.12■□□□□ 0.65
Cdhr1Q8VHP6 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cdhr1Q8VHP6 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC19.12■□□□□ 0.65
Cdhr1Q8VHP6 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cdhr1Q8VHP6 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cdhr1Q8VHP6 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Cdhr1Q8VHP6 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC19.11■□□□□ 0.65
Cdhr1Q8VHP6 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cdhr1Q8VHP6 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cdhr1Q8VHP6 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC19.11■□□□□ 0.65
Cdhr1Q8VHP6 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cdhr1Q8VHP6 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cdhr1Q8VHP6 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Cdhr1Q8VHP6 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Cdhr1Q8VHP6 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cdhr1Q8VHP6 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cdhr1Q8VHP6 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cdhr1Q8VHP6 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cdhr1Q8VHP6 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cdhr1Q8VHP6 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
Cdhr1Q8VHP6 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cdhr1Q8VHP6 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC19.1■□□□□ 0.65
Cdhr1Q8VHP6 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC19.1■□□□□ 0.65
Cdhr1Q8VHP6 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cdhr1Q8VHP6 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
Cdhr1Q8VHP6 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms