Protein–RNA interactions for Protein: Q8VEJ4

Nle1, Notchless protein homolog 1, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nle1Q8VEJ4 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Nle1Q8VEJ4 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Nle1Q8VEJ4 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Nle1Q8VEJ4 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Nle1Q8VEJ4 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Nle1Q8VEJ4 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC20.39■□□□□ 0.85
Nle1Q8VEJ4 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Nle1Q8VEJ4 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Nle1Q8VEJ4 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Nle1Q8VEJ4 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Nle1Q8VEJ4 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC20.38■□□□□ 0.85
Nle1Q8VEJ4 AC099934.2-201ENSMUST00000196389 70 ntBASIC20.38■□□□□ 0.85
Nle1Q8VEJ4 AC156953.1-201ENSMUST00000196953 70 ntBASIC20.38■□□□□ 0.85
Nle1Q8VEJ4 AC157822.2-201ENSMUST00000200291 70 ntBASIC20.38■□□□□ 0.85
Nle1Q8VEJ4 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Nle1Q8VEJ4 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Nle1Q8VEJ4 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
Nle1Q8VEJ4 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Nle1Q8VEJ4 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Nle1Q8VEJ4 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Nle1Q8VEJ4 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Nle1Q8VEJ4 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Nle1Q8VEJ4 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Nle1Q8VEJ4 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.37■□□□□ 0.85
Nle1Q8VEJ4 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Nle1Q8VEJ4 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Nle1Q8VEJ4 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC20.37■□□□□ 0.85
Nle1Q8VEJ4 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Nle1Q8VEJ4 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Nle1Q8VEJ4 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.36■□□□□ 0.85
Nle1Q8VEJ4 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Nle1Q8VEJ4 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nle1Q8VEJ4 Gm27801-201ENSMUST00000184174 223 ntBASIC20.36■□□□□ 0.85
Nle1Q8VEJ4 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nle1Q8VEJ4 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC20.36■□□□□ 0.85
Nle1Q8VEJ4 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Nle1Q8VEJ4 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Nle1Q8VEJ4 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nle1Q8VEJ4 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nle1Q8VEJ4 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nle1Q8VEJ4 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nle1Q8VEJ4 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nle1Q8VEJ4 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nle1Q8VEJ4 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nle1Q8VEJ4 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nle1Q8VEJ4 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC20.35■□□□□ 0.85
Nle1Q8VEJ4 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nle1Q8VEJ4 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC20.35■□□□□ 0.85
Nle1Q8VEJ4 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC20.34■□□□□ 0.85
Nle1Q8VEJ4 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC20.34■□□□□ 0.85
Nle1Q8VEJ4 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC20.34■□□□□ 0.85
Nle1Q8VEJ4 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Nle1Q8VEJ4 AA386476-201ENSMUST00000098781 1665 ntBASIC20.34■□□□□ 0.85
Nle1Q8VEJ4 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Nle1Q8VEJ4 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Nle1Q8VEJ4 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Nle1Q8VEJ4 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC20.33■□□□□ 0.85
Nle1Q8VEJ4 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Nle1Q8VEJ4 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC20.32■□□□□ 0.84
Nle1Q8VEJ4 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Nle1Q8VEJ4 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC20.32■□□□□ 0.84
Nle1Q8VEJ4 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nle1Q8VEJ4 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Nle1Q8VEJ4 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Nle1Q8VEJ4 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nle1Q8VEJ4 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nle1Q8VEJ4 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Nle1Q8VEJ4 Gm43909-201ENSMUST00000203443 1876 ntBASIC20.32■□□□□ 0.84
Nle1Q8VEJ4 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nle1Q8VEJ4 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC20.32■□□□□ 0.84
Nle1Q8VEJ4 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nle1Q8VEJ4 Gm42911-201ENSMUST00000199360 1630 ntBASIC20.31■□□□□ 0.84
Nle1Q8VEJ4 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nle1Q8VEJ4 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Nle1Q8VEJ4 Gm14281-201ENSMUST00000121700 1294 ntBASIC20.31■□□□□ 0.84
Nle1Q8VEJ4 Gm42642-201ENSMUST00000200683 355 ntBASIC20.31■□□□□ 0.84
Nle1Q8VEJ4 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC20.31■□□□□ 0.84
Nle1Q8VEJ4 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nle1Q8VEJ4 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Nle1Q8VEJ4 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nle1Q8VEJ4 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nle1Q8VEJ4 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.31■□□□□ 0.84
Nle1Q8VEJ4 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nle1Q8VEJ4 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nle1Q8VEJ4 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nle1Q8VEJ4 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nle1Q8VEJ4 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nle1Q8VEJ4 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.3■□□□□ 0.84
Nle1Q8VEJ4 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nle1Q8VEJ4 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Nle1Q8VEJ4 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nle1Q8VEJ4 Slc35b2-207ENSMUST00000226086 850 ntBASIC20.3■□□□□ 0.84
Nle1Q8VEJ4 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nle1Q8VEJ4 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Nle1Q8VEJ4 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Nle1Q8VEJ4 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nle1Q8VEJ4 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC20.29■□□□□ 0.84
Nle1Q8VEJ4 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC20.29■□□□□ 0.84
Nle1Q8VEJ4 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC20.29■□□□□ 0.84
Nle1Q8VEJ4 AC154266.1-201ENSMUST00000223190 503 ntBASIC20.29■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms