Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Vps39Q8R5L3 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Vps39Q8R5L3 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
Vps39Q8R5L3 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Vps39Q8R5L3 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Vps39Q8R5L3 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Vps39Q8R5L3 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Vps39Q8R5L3 Golph3-202ENSMUST00000226517 2359 ntBASIC19.64■□□□□ 0.74
Vps39Q8R5L3 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Vps39Q8R5L3 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC19.64■□□□□ 0.73
Vps39Q8R5L3 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Vps39Q8R5L3 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Vps39Q8R5L3 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC19.64■□□□□ 0.73
Vps39Q8R5L3 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Vps39Q8R5L3 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Vps39Q8R5L3 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Vps39Q8R5L3 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Vps39Q8R5L3 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Vps39Q8R5L3 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Vps39Q8R5L3 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Vps39Q8R5L3 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Vps39Q8R5L3 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Vps39Q8R5L3 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Vps39Q8R5L3 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC19.63■□□□□ 0.73
Vps39Q8R5L3 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Vps39Q8R5L3 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Vps39Q8R5L3 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Vps39Q8R5L3 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Vps39Q8R5L3 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Vps39Q8R5L3 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC19.62■□□□□ 0.73
Vps39Q8R5L3 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Vps39Q8R5L3 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Vps39Q8R5L3 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC19.62■□□□□ 0.73
Vps39Q8R5L3 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC19.62■□□□□ 0.73
Vps39Q8R5L3 Gm8770-201ENSMUST00000121113 1109 ntBASIC19.62■□□□□ 0.73
Vps39Q8R5L3 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC19.62■□□□□ 0.73
Vps39Q8R5L3 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC19.62■□□□□ 0.73
Vps39Q8R5L3 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Vps39Q8R5L3 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Vps39Q8R5L3 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Vps39Q8R5L3 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Vps39Q8R5L3 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Vps39Q8R5L3 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Vps39Q8R5L3 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
Vps39Q8R5L3 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Vps39Q8R5L3 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
Vps39Q8R5L3 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Vps39Q8R5L3 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Vps39Q8R5L3 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Vps39Q8R5L3 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Vps39Q8R5L3 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC19.6■□□□□ 0.73
Vps39Q8R5L3 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC19.6■□□□□ 0.73
Vps39Q8R5L3 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC19.6■□□□□ 0.73
Vps39Q8R5L3 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC19.6■□□□□ 0.73
Vps39Q8R5L3 Gm27045-201ENSMUST00000182145 1402 ntBASIC19.59■□□□□ 0.73
Vps39Q8R5L3 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC19.59■□□□□ 0.73
Vps39Q8R5L3 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Vps39Q8R5L3 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC19.59■□□□□ 0.73
Vps39Q8R5L3 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Vps39Q8R5L3 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Vps39Q8R5L3 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC19.59■□□□□ 0.73
Vps39Q8R5L3 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Vps39Q8R5L3 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Vps39Q8R5L3 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Vps39Q8R5L3 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
Vps39Q8R5L3 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC19.58■□□□□ 0.73
Vps39Q8R5L3 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Vps39Q8R5L3 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC19.58■□□□□ 0.72
Vps39Q8R5L3 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Vps39Q8R5L3 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Vps39Q8R5L3 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Vps39Q8R5L3 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Vps39Q8R5L3 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Vps39Q8R5L3 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Vps39Q8R5L3 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Vps39Q8R5L3 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Vps39Q8R5L3 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Vps39Q8R5L3 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Vps39Q8R5L3 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Vps39Q8R5L3 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Vps39Q8R5L3 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Vps39Q8R5L3 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC19.56■□□□□ 0.72
Vps39Q8R5L3 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Vps39Q8R5L3 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Vps39Q8R5L3 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Vps39Q8R5L3 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Vps39Q8R5L3 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC19.56■□□□□ 0.72
Vps39Q8R5L3 Gm43545-201ENSMUST00000196765 2779 ntBASIC19.55■□□□□ 0.72
Vps39Q8R5L3 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Vps39Q8R5L3 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Vps39Q8R5L3 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Vps39Q8R5L3 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Vps39Q8R5L3 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Vps39Q8R5L3 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Vps39Q8R5L3 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Vps39Q8R5L3 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Vps39Q8R5L3 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Vps39Q8R5L3 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Vps39Q8R5L3 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Vps39Q8R5L3 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms