Protein–RNA interactions for Protein: Q8R550

Sh3kbp1, SH3 domain-containing kinase-binding protein 1, mousemouse

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3kbp1Q8R550 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Sh3kbp1Q8R550 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC20.23■□□□□ 0.83
Sh3kbp1Q8R550 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC20.23■□□□□ 0.83
Sh3kbp1Q8R550 Gm26833-201ENSMUST00000180899 440 ntBASIC20.23■□□□□ 0.83
Sh3kbp1Q8R550 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Sh3kbp1Q8R550 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Sh3kbp1Q8R550 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Sh3kbp1Q8R550 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Sh3kbp1Q8R550 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Sh3kbp1Q8R550 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Sh3kbp1Q8R550 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Sh3kbp1Q8R550 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC20.22■□□□□ 0.83
Sh3kbp1Q8R550 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Sh3kbp1Q8R550 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Sh3kbp1Q8R550 AC152827.1-201ENSMUST00000221143 2189 ntBASIC20.22■□□□□ 0.83
Sh3kbp1Q8R550 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.22■□□□□ 0.83
Sh3kbp1Q8R550 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Sh3kbp1Q8R550 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Sh3kbp1Q8R550 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Sh3kbp1Q8R550 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
Sh3kbp1Q8R550 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Sh3kbp1Q8R550 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sh3kbp1Q8R550 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sh3kbp1Q8R550 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sh3kbp1Q8R550 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Sh3kbp1Q8R550 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sh3kbp1Q8R550 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC20.2■□□□□ 0.82
Sh3kbp1Q8R550 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Sh3kbp1Q8R550 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Sh3kbp1Q8R550 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC20.2■□□□□ 0.82
Sh3kbp1Q8R550 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Sh3kbp1Q8R550 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Sh3kbp1Q8R550 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Sh3kbp1Q8R550 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Sh3kbp1Q8R550 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Sh3kbp1Q8R550 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sh3kbp1Q8R550 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sh3kbp1Q8R550 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sh3kbp1Q8R550 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Sh3kbp1Q8R550 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Sh3kbp1Q8R550 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sh3kbp1Q8R550 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sh3kbp1Q8R550 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sh3kbp1Q8R550 Gm37035-201ENSMUST00000194809 2148 ntBASIC20.18■□□□□ 0.82
Sh3kbp1Q8R550 Gm10616-201ENSMUST00000205285 2127 ntBASIC20.18■□□□□ 0.82
Sh3kbp1Q8R550 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC20.18■□□□□ 0.82
Sh3kbp1Q8R550 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sh3kbp1Q8R550 Mir6236-201ENSMUST00000184437 123 ntBASIC20.18■□□□□ 0.82
Sh3kbp1Q8R550 AC164629.5-201ENSMUST00000220387 632 ntBASIC20.18■□□□□ 0.82
Sh3kbp1Q8R550 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sh3kbp1Q8R550 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC20.18■□□□□ 0.82
Sh3kbp1Q8R550 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sh3kbp1Q8R550 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sh3kbp1Q8R550 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Sh3kbp1Q8R550 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sh3kbp1Q8R550 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sh3kbp1Q8R550 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sh3kbp1Q8R550 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC20.17■□□□□ 0.82
Sh3kbp1Q8R550 Gm43060-201ENSMUST00000200621 289 ntBASIC20.17■□□□□ 0.82
Sh3kbp1Q8R550 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Sh3kbp1Q8R550 Gm40848-201ENSMUST00000221998 324 ntBASIC20.17■□□□□ 0.82
Sh3kbp1Q8R550 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC20.17■□□□□ 0.82
Sh3kbp1Q8R550 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sh3kbp1Q8R550 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sh3kbp1Q8R550 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Sh3kbp1Q8R550 Gm10209-201ENSMUST00000203397 1607 ntBASIC20.16■□□□□ 0.82
Sh3kbp1Q8R550 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sh3kbp1Q8R550 Golph3-202ENSMUST00000226517 2359 ntBASIC20.16■□□□□ 0.82
Sh3kbp1Q8R550 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Sh3kbp1Q8R550 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Sh3kbp1Q8R550 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sh3kbp1Q8R550 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Sh3kbp1Q8R550 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sh3kbp1Q8R550 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sh3kbp1Q8R550 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sh3kbp1Q8R550 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Sh3kbp1Q8R550 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Sh3kbp1Q8R550 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Sh3kbp1Q8R550 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Sh3kbp1Q8R550 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Sh3kbp1Q8R550 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Sh3kbp1Q8R550 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC20.15■□□□□ 0.82
Sh3kbp1Q8R550 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Sh3kbp1Q8R550 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
Sh3kbp1Q8R550 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.82
Sh3kbp1Q8R550 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Sh3kbp1Q8R550 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Sh3kbp1Q8R550 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Sh3kbp1Q8R550 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Sh3kbp1Q8R550 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC20.14■□□□□ 0.81
Sh3kbp1Q8R550 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Sh3kbp1Q8R550 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Sh3kbp1Q8R550 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Sh3kbp1Q8R550 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Sh3kbp1Q8R550 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Sh3kbp1Q8R550 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Sh3kbp1Q8R550 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Sh3kbp1Q8R550 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Sh3kbp1Q8R550 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC20.13■□□□□ 0.81
Sh3kbp1Q8R550 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms