Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nudcd3Q8R1N4 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nudcd3Q8R1N4 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nudcd3Q8R1N4 Cdkn3-203ENSMUST00000227149 1952 ntBASIC19.59■□□□□ 0.73
Nudcd3Q8R1N4 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Nudcd3Q8R1N4 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
Nudcd3Q8R1N4 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Nudcd3Q8R1N4 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC19.58■□□□□ 0.72
Nudcd3Q8R1N4 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Nudcd3Q8R1N4 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC19.58■□□□□ 0.72
Nudcd3Q8R1N4 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC19.58■□□□□ 0.72
Nudcd3Q8R1N4 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Nudcd3Q8R1N4 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC19.58■□□□□ 0.72
Nudcd3Q8R1N4 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Nudcd3Q8R1N4 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Nudcd3Q8R1N4 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Nudcd3Q8R1N4 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Nudcd3Q8R1N4 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Nudcd3Q8R1N4 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Nudcd3Q8R1N4 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nudcd3Q8R1N4 Gm13238-201ENSMUST00000117655 780 ntBASIC19.57■□□□□ 0.72
Nudcd3Q8R1N4 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Nudcd3Q8R1N4 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nudcd3Q8R1N4 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nudcd3Q8R1N4 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nudcd3Q8R1N4 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nudcd3Q8R1N4 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Nudcd3Q8R1N4 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nudcd3Q8R1N4 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nudcd3Q8R1N4 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nudcd3Q8R1N4 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nudcd3Q8R1N4 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nudcd3Q8R1N4 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC19.56■□□□□ 0.72
Nudcd3Q8R1N4 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Nudcd3Q8R1N4 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nudcd3Q8R1N4 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nudcd3Q8R1N4 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Nudcd3Q8R1N4 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC19.56■□□□□ 0.72
Nudcd3Q8R1N4 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC19.56■□□□□ 0.72
Nudcd3Q8R1N4 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nudcd3Q8R1N4 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nudcd3Q8R1N4 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nudcd3Q8R1N4 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Nudcd3Q8R1N4 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Nudcd3Q8R1N4 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Nudcd3Q8R1N4 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Nudcd3Q8R1N4 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Nudcd3Q8R1N4 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC19.55■□□□□ 0.72
Nudcd3Q8R1N4 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC19.55■□□□□ 0.72
Nudcd3Q8R1N4 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Nudcd3Q8R1N4 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Nudcd3Q8R1N4 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Nudcd3Q8R1N4 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Nudcd3Q8R1N4 Dapk1-207ENSMUST00000226059 5009 ntBASIC19.55■□□□□ 0.72
Nudcd3Q8R1N4 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
Nudcd3Q8R1N4 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Nudcd3Q8R1N4 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nudcd3Q8R1N4 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Nudcd3Q8R1N4 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Nudcd3Q8R1N4 Gm43566-201ENSMUST00000196851 808 ntBASIC19.54■□□□□ 0.72
Nudcd3Q8R1N4 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nudcd3Q8R1N4 Golph3-205ENSMUST00000228671 2842 ntBASIC19.54■□□□□ 0.72
Nudcd3Q8R1N4 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nudcd3Q8R1N4 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Nudcd3Q8R1N4 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Nudcd3Q8R1N4 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Nudcd3Q8R1N4 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Nudcd3Q8R1N4 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Nudcd3Q8R1N4 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Nudcd3Q8R1N4 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC19.53■□□□□ 0.72
Nudcd3Q8R1N4 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Nudcd3Q8R1N4 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC19.53■□□□□ 0.72
Nudcd3Q8R1N4 Mir6236-201ENSMUST00000184437 123 ntBASIC19.52■□□□□ 0.72
Nudcd3Q8R1N4 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC19.52■□□□□ 0.72
Nudcd3Q8R1N4 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Nudcd3Q8R1N4 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Nudcd3Q8R1N4 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Nudcd3Q8R1N4 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Nudcd3Q8R1N4 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Nudcd3Q8R1N4 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Nudcd3Q8R1N4 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Nudcd3Q8R1N4 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Nudcd3Q8R1N4 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Nudcd3Q8R1N4 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Nudcd3Q8R1N4 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC19.51■□□□□ 0.71
Nudcd3Q8R1N4 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Nudcd3Q8R1N4 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Nudcd3Q8R1N4 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Nudcd3Q8R1N4 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Nudcd3Q8R1N4 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Nudcd3Q8R1N4 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
Nudcd3Q8R1N4 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Nudcd3Q8R1N4 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Nudcd3Q8R1N4 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC19.51■□□□□ 0.71
Nudcd3Q8R1N4 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Nudcd3Q8R1N4 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Nudcd3Q8R1N4 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Nudcd3Q8R1N4 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC19.5■□□□□ 0.71
Nudcd3Q8R1N4 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Nudcd3Q8R1N4 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms