Protein–RNA interactions for Protein: Q8R1J1

Tm6sf2, Transmembrane 6 superfamily member 2, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tm6sf2Q8R1J1 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Tm6sf2Q8R1J1 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Tm6sf2Q8R1J1 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC18.46■□□□□ 0.55
Tm6sf2Q8R1J1 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Tm6sf2Q8R1J1 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Tm6sf2Q8R1J1 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Tm6sf2Q8R1J1 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Tm6sf2Q8R1J1 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Tm6sf2Q8R1J1 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC18.45■□□□□ 0.54
Tm6sf2Q8R1J1 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Tm6sf2Q8R1J1 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Tm6sf2Q8R1J1 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Tm6sf2Q8R1J1 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Tm6sf2Q8R1J1 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC18.45■□□□□ 0.54
Tm6sf2Q8R1J1 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Tm6sf2Q8R1J1 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Tm6sf2Q8R1J1 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Tm6sf2Q8R1J1 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Tm6sf2Q8R1J1 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Tm6sf2Q8R1J1 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Tm6sf2Q8R1J1 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
Tm6sf2Q8R1J1 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Tm6sf2Q8R1J1 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
Tm6sf2Q8R1J1 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC18.44■□□□□ 0.54
Tm6sf2Q8R1J1 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Tm6sf2Q8R1J1 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Tm6sf2Q8R1J1 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Tm6sf2Q8R1J1 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Tm6sf2Q8R1J1 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Tm6sf2Q8R1J1 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Tm6sf2Q8R1J1 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC18.43■□□□□ 0.54
Tm6sf2Q8R1J1 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Tm6sf2Q8R1J1 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Tm6sf2Q8R1J1 Cdkn3-203ENSMUST00000227149 1952 ntBASIC18.43■□□□□ 0.54
Tm6sf2Q8R1J1 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Tm6sf2Q8R1J1 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Tm6sf2Q8R1J1 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Tm6sf2Q8R1J1 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Tm6sf2Q8R1J1 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Tm6sf2Q8R1J1 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Tm6sf2Q8R1J1 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC18.43■□□□□ 0.54
Tm6sf2Q8R1J1 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Tm6sf2Q8R1J1 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Tm6sf2Q8R1J1 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Tm6sf2Q8R1J1 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Tm6sf2Q8R1J1 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Tm6sf2Q8R1J1 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Tm6sf2Q8R1J1 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Tm6sf2Q8R1J1 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC18.42■□□□□ 0.54
Tm6sf2Q8R1J1 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Tm6sf2Q8R1J1 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
Tm6sf2Q8R1J1 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC18.42■□□□□ 0.54
Tm6sf2Q8R1J1 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Tm6sf2Q8R1J1 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Tm6sf2Q8R1J1 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC18.41■□□□□ 0.54
Tm6sf2Q8R1J1 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Tm6sf2Q8R1J1 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Tm6sf2Q8R1J1 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Tm6sf2Q8R1J1 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC18.41■□□□□ 0.54
Tm6sf2Q8R1J1 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Tm6sf2Q8R1J1 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Tm6sf2Q8R1J1 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC18.41■□□□□ 0.54
Tm6sf2Q8R1J1 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Tm6sf2Q8R1J1 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Tm6sf2Q8R1J1 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Tm6sf2Q8R1J1 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Tm6sf2Q8R1J1 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Tm6sf2Q8R1J1 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Tm6sf2Q8R1J1 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Tm6sf2Q8R1J1 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tm6sf2Q8R1J1 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tm6sf2Q8R1J1 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tm6sf2Q8R1J1 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Tm6sf2Q8R1J1 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tm6sf2Q8R1J1 AC137127.1-201ENSMUST00000213466 1078 ntBASIC18.4■□□□□ 0.54
Tm6sf2Q8R1J1 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Tm6sf2Q8R1J1 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Tm6sf2Q8R1J1 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Tm6sf2Q8R1J1 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Tm6sf2Q8R1J1 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tm6sf2Q8R1J1 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tm6sf2Q8R1J1 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Tm6sf2Q8R1J1 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Tm6sf2Q8R1J1 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC18.39■□□□□ 0.53
Tm6sf2Q8R1J1 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Tm6sf2Q8R1J1 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Tm6sf2Q8R1J1 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Tm6sf2Q8R1J1 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC18.39■□□□□ 0.53
Tm6sf2Q8R1J1 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Tm6sf2Q8R1J1 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Tm6sf2Q8R1J1 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Tm6sf2Q8R1J1 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC18.39■□□□□ 0.53
Tm6sf2Q8R1J1 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Tm6sf2Q8R1J1 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Tm6sf2Q8R1J1 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Tm6sf2Q8R1J1 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Tm6sf2Q8R1J1 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tm6sf2Q8R1J1 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tm6sf2Q8R1J1 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tm6sf2Q8R1J1 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms