Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC21.13■□□□□ 0.97
Rpp40Q8R1F9 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rpp40Q8R1F9 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Rpp40Q8R1F9 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rpp40Q8R1F9 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Rpp40Q8R1F9 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rpp40Q8R1F9 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rpp40Q8R1F9 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Rpp40Q8R1F9 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rpp40Q8R1F9 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Rpp40Q8R1F9 AC124392.1-201ENSMUST00000225172 5324 ntBASIC21.12■□□□□ 0.97
Rpp40Q8R1F9 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Rpp40Q8R1F9 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC21.12■□□□□ 0.97
Rpp40Q8R1F9 AC137127.1-201ENSMUST00000213466 1078 ntBASIC21.12■□□□□ 0.97
Rpp40Q8R1F9 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rpp40Q8R1F9 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Rpp40Q8R1F9 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rpp40Q8R1F9 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Rpp40Q8R1F9 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Rpp40Q8R1F9 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rpp40Q8R1F9 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
Rpp40Q8R1F9 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Rpp40Q8R1F9 Gm6802-201ENSMUST00000167843 1983 ntBASIC21.11■□□□□ 0.97
Rpp40Q8R1F9 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC21.11■□□□□ 0.97
Rpp40Q8R1F9 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rpp40Q8R1F9 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC21.11■□□□□ 0.97
Rpp40Q8R1F9 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rpp40Q8R1F9 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rpp40Q8R1F9 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rpp40Q8R1F9 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rpp40Q8R1F9 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Rpp40Q8R1F9 AA386476-201ENSMUST00000098781 1665 ntBASIC21.11■□□□□ 0.97
Rpp40Q8R1F9 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rpp40Q8R1F9 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Rpp40Q8R1F9 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Rpp40Q8R1F9 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rpp40Q8R1F9 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC21.1■□□□□ 0.97
Rpp40Q8R1F9 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rpp40Q8R1F9 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC21.1■□□□□ 0.97
Rpp40Q8R1F9 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rpp40Q8R1F9 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rpp40Q8R1F9 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rpp40Q8R1F9 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rpp40Q8R1F9 Gm10571-201ENSMUST00000097869 1638 ntBASIC21.09■□□□□ 0.97
Rpp40Q8R1F9 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rpp40Q8R1F9 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC21.09■□□□□ 0.97
Rpp40Q8R1F9 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rpp40Q8R1F9 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Rpp40Q8R1F9 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Rpp40Q8R1F9 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Rpp40Q8R1F9 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC21.08■□□□□ 0.97
Rpp40Q8R1F9 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC21.08■□□□□ 0.97
Rpp40Q8R1F9 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC21.08■□□□□ 0.97
Rpp40Q8R1F9 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
Rpp40Q8R1F9 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Rpp40Q8R1F9 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Rpp40Q8R1F9 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Rpp40Q8R1F9 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
Rpp40Q8R1F9 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
Rpp40Q8R1F9 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Rpp40Q8R1F9 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Rpp40Q8R1F9 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Rpp40Q8R1F9 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
Rpp40Q8R1F9 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Rpp40Q8R1F9 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
Rpp40Q8R1F9 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Rpp40Q8R1F9 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Rpp40Q8R1F9 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Rpp40Q8R1F9 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rpp40Q8R1F9 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rpp40Q8R1F9 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rpp40Q8R1F9 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rpp40Q8R1F9 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rpp40Q8R1F9 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rpp40Q8R1F9 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Rpp40Q8R1F9 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rpp40Q8R1F9 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rpp40Q8R1F9 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rpp40Q8R1F9 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
Rpp40Q8R1F9 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
Rpp40Q8R1F9 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rpp40Q8R1F9 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC21.06■□□□□ 0.96
Rpp40Q8R1F9 Gm42911-201ENSMUST00000199360 1630 ntBASIC21.06■□□□□ 0.96
Rpp40Q8R1F9 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Rpp40Q8R1F9 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Rpp40Q8R1F9 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Rpp40Q8R1F9 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC21.05■□□□□ 0.96
Rpp40Q8R1F9 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rpp40Q8R1F9 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rpp40Q8R1F9 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rpp40Q8R1F9 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Rpp40Q8R1F9 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rpp40Q8R1F9 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rpp40Q8R1F9 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rpp40Q8R1F9 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rpp40Q8R1F9 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC21.05■□□□□ 0.96
Rpp40Q8R1F9 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rpp40Q8R1F9 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Rpp40Q8R1F9 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC21.04■□□□□ 0.96
Rpp40Q8R1F9 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms