Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Ddx54Q8K4L0 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC26.02■■□□□ 1.76
Ddx54Q8K4L0 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC26.02■■□□□ 1.76
Ddx54Q8K4L0 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Ddx54Q8K4L0 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Ddx54Q8K4L0 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Ddx54Q8K4L0 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC26.01■■□□□ 1.75
Ddx54Q8K4L0 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Ddx54Q8K4L0 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
Ddx54Q8K4L0 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC26.01■■□□□ 1.75
Ddx54Q8K4L0 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC26.01■■□□□ 1.75
Ddx54Q8K4L0 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
Ddx54Q8K4L0 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Ddx54Q8K4L0 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC26■■□□□ 1.75
Ddx54Q8K4L0 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC26■■□□□ 1.75
Ddx54Q8K4L0 Gm13534-201ENSMUST00000121169 513 ntBASIC26■■□□□ 1.75
Ddx54Q8K4L0 AL672049.1-201ENSMUST00000197943 91 ntBASIC26■■□□□ 1.75
Ddx54Q8K4L0 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Ddx54Q8K4L0 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC26■■□□□ 1.75
Ddx54Q8K4L0 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC26■■□□□ 1.75
Ddx54Q8K4L0 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Ddx54Q8K4L0 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Ddx54Q8K4L0 Gm5913-201ENSMUST00000119397 1399 ntBASIC25.99■■□□□ 1.75
Ddx54Q8K4L0 AC153962.1-201ENSMUST00000218530 1948 ntBASIC25.99■■□□□ 1.75
Ddx54Q8K4L0 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
Ddx54Q8K4L0 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC25.99■■□□□ 1.75
Ddx54Q8K4L0 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Ddx54Q8K4L0 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
Ddx54Q8K4L0 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC25.98■■□□□ 1.75
Ddx54Q8K4L0 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
Ddx54Q8K4L0 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Ddx54Q8K4L0 Gm26524-201ENSMUST00000192339 390 ntBASIC25.97■■□□□ 1.75
Ddx54Q8K4L0 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
Ddx54Q8K4L0 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC25.97■■□□□ 1.75
Ddx54Q8K4L0 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Ddx54Q8K4L0 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Ddx54Q8K4L0 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Ddx54Q8K4L0 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
Ddx54Q8K4L0 Rab3c-203ENSMUST00000224180 967 ntBASIC25.96■■□□□ 1.75
Ddx54Q8K4L0 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Ddx54Q8K4L0 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Ddx54Q8K4L0 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Ddx54Q8K4L0 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
Ddx54Q8K4L0 Gm43403-201ENSMUST00000198011 1786 ntBASIC25.96■■□□□ 1.75
Ddx54Q8K4L0 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC25.96■■□□□ 1.75
Ddx54Q8K4L0 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Ddx54Q8K4L0 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC25.95■■□□□ 1.75
Ddx54Q8K4L0 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
Ddx54Q8K4L0 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC25.95■■□□□ 1.74
Ddx54Q8K4L0 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC25.95■■□□□ 1.74
Ddx54Q8K4L0 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC25.95■■□□□ 1.74
Ddx54Q8K4L0 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC25.95■■□□□ 1.74
Ddx54Q8K4L0 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Ddx54Q8K4L0 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC25.94■■□□□ 1.74
Ddx54Q8K4L0 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
Ddx54Q8K4L0 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
Ddx54Q8K4L0 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Ddx54Q8K4L0 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
Ddx54Q8K4L0 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
Ddx54Q8K4L0 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC25.93■■□□□ 1.74
Ddx54Q8K4L0 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC25.93■■□□□ 1.74
Ddx54Q8K4L0 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC25.93■■□□□ 1.74
Ddx54Q8K4L0 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
Ddx54Q8K4L0 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Ddx54Q8K4L0 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC25.92■■□□□ 1.74
Ddx54Q8K4L0 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Ddx54Q8K4L0 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Ddx54Q8K4L0 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Ddx54Q8K4L0 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC25.91■■□□□ 1.74
Ddx54Q8K4L0 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC25.91■■□□□ 1.74
Ddx54Q8K4L0 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
Ddx54Q8K4L0 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC25.91■■□□□ 1.74
Ddx54Q8K4L0 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Ddx54Q8K4L0 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Ddx54Q8K4L0 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Ddx54Q8K4L0 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC25.9■■□□□ 1.74
Ddx54Q8K4L0 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Ddx54Q8K4L0 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC25.9■■□□□ 1.74
Ddx54Q8K4L0 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC25.9■■□□□ 1.74
Ddx54Q8K4L0 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC25.9■■□□□ 1.74
Ddx54Q8K4L0 Gm715-201ENSMUST00000117865 831 ntBASIC25.9■■□□□ 1.74
Ddx54Q8K4L0 Gm12896-201ENSMUST00000118430 226 ntBASIC25.9■■□□□ 1.74
Ddx54Q8K4L0 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC25.9■■□□□ 1.74
Ddx54Q8K4L0 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
Ddx54Q8K4L0 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC25.9■■□□□ 1.74
Ddx54Q8K4L0 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC25.9■■□□□ 1.74
Ddx54Q8K4L0 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
Ddx54Q8K4L0 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC25.9■■□□□ 1.74
Ddx54Q8K4L0 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Ddx54Q8K4L0 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
Ddx54Q8K4L0 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC25.89■■□□□ 1.74
Ddx54Q8K4L0 Gm5643-201ENSMUST00000117081 966 ntBASIC25.89■■□□□ 1.74
Ddx54Q8K4L0 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC25.89■■□□□ 1.74
Ddx54Q8K4L0 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
Ddx54Q8K4L0 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC25.88■■□□□ 1.73
Ddx54Q8K4L0 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC25.88■■□□□ 1.73
Ddx54Q8K4L0 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC25.88■■□□□ 1.73
Ddx54Q8K4L0 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
Ddx54Q8K4L0 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC25.88■■□□□ 1.73
Ddx54Q8K4L0 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms