Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Gm6085-201ENSMUST00000182774 1470 ntBASIC23.23■■□□□ 1.31
Cchcr1Q8K2I2 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Cchcr1Q8K2I2 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC23.22■■□□□ 1.31
Cchcr1Q8K2I2 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Cchcr1Q8K2I2 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
Cchcr1Q8K2I2 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Cchcr1Q8K2I2 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
Cchcr1Q8K2I2 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.31
Cchcr1Q8K2I2 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
Cchcr1Q8K2I2 Hsf1-204ENSMUST00000226872 2104 ntBASIC23.2■■□□□ 1.3
Cchcr1Q8K2I2 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Cchcr1Q8K2I2 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
Cchcr1Q8K2I2 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.3
Cchcr1Q8K2I2 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC23.2■■□□□ 1.3
Cchcr1Q8K2I2 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Cchcr1Q8K2I2 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.3
Cchcr1Q8K2I2 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Cchcr1Q8K2I2 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Cchcr1Q8K2I2 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Cchcr1Q8K2I2 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Cchcr1Q8K2I2 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC23.19■■□□□ 1.3
Cchcr1Q8K2I2 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
Cchcr1Q8K2I2 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Cchcr1Q8K2I2 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Cchcr1Q8K2I2 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Cchcr1Q8K2I2 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Cchcr1Q8K2I2 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Cchcr1Q8K2I2 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Cchcr1Q8K2I2 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Cchcr1Q8K2I2 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Cchcr1Q8K2I2 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Cchcr1Q8K2I2 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Cchcr1Q8K2I2 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Cchcr1Q8K2I2 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Cchcr1Q8K2I2 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Cchcr1Q8K2I2 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Cchcr1Q8K2I2 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Cchcr1Q8K2I2 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
Cchcr1Q8K2I2 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
Cchcr1Q8K2I2 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Cchcr1Q8K2I2 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Cchcr1Q8K2I2 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
Cchcr1Q8K2I2 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Cchcr1Q8K2I2 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
Cchcr1Q8K2I2 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC23.16■■□□□ 1.3
Cchcr1Q8K2I2 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC23.16■■□□□ 1.3
Cchcr1Q8K2I2 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Cchcr1Q8K2I2 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC23.16■■□□□ 1.3
Cchcr1Q8K2I2 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Cchcr1Q8K2I2 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
Cchcr1Q8K2I2 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Cchcr1Q8K2I2 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
Cchcr1Q8K2I2 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Cchcr1Q8K2I2 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC23.16■■□□□ 1.3
Cchcr1Q8K2I2 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
Cchcr1Q8K2I2 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Cchcr1Q8K2I2 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
Cchcr1Q8K2I2 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC23.15■■□□□ 1.3
Cchcr1Q8K2I2 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Cchcr1Q8K2I2 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC23.14■■□□□ 1.29
Cchcr1Q8K2I2 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Cchcr1Q8K2I2 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC23.14■■□□□ 1.29
Cchcr1Q8K2I2 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
Cchcr1Q8K2I2 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.29
Cchcr1Q8K2I2 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC23.14■■□□□ 1.29
Cchcr1Q8K2I2 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Cchcr1Q8K2I2 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
Cchcr1Q8K2I2 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Cchcr1Q8K2I2 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC23.13■■□□□ 1.29
Cchcr1Q8K2I2 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Cchcr1Q8K2I2 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Cchcr1Q8K2I2 AA386476-201ENSMUST00000098781 1665 ntBASIC23.13■■□□□ 1.29
Cchcr1Q8K2I2 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Cchcr1Q8K2I2 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Cchcr1Q8K2I2 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Cchcr1Q8K2I2 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Cchcr1Q8K2I2 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC23.13■■□□□ 1.29
Cchcr1Q8K2I2 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC23.12■■□□□ 1.29
Cchcr1Q8K2I2 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Cchcr1Q8K2I2 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
Cchcr1Q8K2I2 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Cchcr1Q8K2I2 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Cchcr1Q8K2I2 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Cchcr1Q8K2I2 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC23.11■■□□□ 1.29
Cchcr1Q8K2I2 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Cchcr1Q8K2I2 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Cchcr1Q8K2I2 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
Cchcr1Q8K2I2 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Cchcr1Q8K2I2 Gm12922-201ENSMUST00000120626 809 ntBASIC23.1■■□□□ 1.29
Cchcr1Q8K2I2 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC23.1■■□□□ 1.29
Cchcr1Q8K2I2 Golgb1-201ENSMUST00000023534 498 ntBASIC23.1■■□□□ 1.29
Cchcr1Q8K2I2 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC23.1■■□□□ 1.29
Cchcr1Q8K2I2 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Cchcr1Q8K2I2 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC23.1■■□□□ 1.29
Cchcr1Q8K2I2 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Cchcr1Q8K2I2 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Cchcr1Q8K2I2 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
Cchcr1Q8K2I2 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Cchcr1Q8K2I2 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC23.09■■□□□ 1.29
Cchcr1Q8K2I2 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC23.09■■□□□ 1.29
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms