Protein–RNA interactions for Protein: Q8K297

Colgalt1, Procollagen galactosyltransferase 1, mousemouse

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Colgalt1Q8K297 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Colgalt1Q8K297 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Colgalt1Q8K297 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Colgalt1Q8K297 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Colgalt1Q8K297 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Colgalt1Q8K297 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Colgalt1Q8K297 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Colgalt1Q8K297 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Colgalt1Q8K297 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Colgalt1Q8K297 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Colgalt1Q8K297 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC21.18■□□□□ 0.98
Colgalt1Q8K297 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Colgalt1Q8K297 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Colgalt1Q8K297 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Colgalt1Q8K297 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Colgalt1Q8K297 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC21.17■□□□□ 0.98
Colgalt1Q8K297 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Colgalt1Q8K297 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Colgalt1Q8K297 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Colgalt1Q8K297 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC21.17■□□□□ 0.98
Colgalt1Q8K297 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Colgalt1Q8K297 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Colgalt1Q8K297 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Colgalt1Q8K297 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Colgalt1Q8K297 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Colgalt1Q8K297 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Colgalt1Q8K297 Gm43006-201ENSMUST00000197702 1602 ntBASIC21.16■□□□□ 0.98
Colgalt1Q8K297 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Colgalt1Q8K297 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Colgalt1Q8K297 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Colgalt1Q8K297 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Colgalt1Q8K297 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Colgalt1Q8K297 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Colgalt1Q8K297 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Colgalt1Q8K297 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Colgalt1Q8K297 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Colgalt1Q8K297 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Colgalt1Q8K297 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Colgalt1Q8K297 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
Colgalt1Q8K297 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Colgalt1Q8K297 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Colgalt1Q8K297 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC21.14■□□□□ 0.97
Colgalt1Q8K297 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Colgalt1Q8K297 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Colgalt1Q8K297 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Colgalt1Q8K297 AC122428.2-201ENSMUST00000216321 1832 ntBASIC21.13■□□□□ 0.97
Colgalt1Q8K297 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Colgalt1Q8K297 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Colgalt1Q8K297 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Colgalt1Q8K297 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Colgalt1Q8K297 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Colgalt1Q8K297 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Colgalt1Q8K297 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Colgalt1Q8K297 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Colgalt1Q8K297 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Colgalt1Q8K297 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Colgalt1Q8K297 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Colgalt1Q8K297 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Colgalt1Q8K297 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Colgalt1Q8K297 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Colgalt1Q8K297 Gm10571-201ENSMUST00000097869 1638 ntBASIC21.12■□□□□ 0.97
Colgalt1Q8K297 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC21.12■□□□□ 0.97
Colgalt1Q8K297 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC21.12■□□□□ 0.97
Colgalt1Q8K297 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Colgalt1Q8K297 Ap3s1-204ENSMUST00000225520 957 ntBASIC21.12■□□□□ 0.97
Colgalt1Q8K297 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Colgalt1Q8K297 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC21.12■□□□□ 0.97
Colgalt1Q8K297 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Colgalt1Q8K297 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Colgalt1Q8K297 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Colgalt1Q8K297 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Colgalt1Q8K297 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Colgalt1Q8K297 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Colgalt1Q8K297 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Colgalt1Q8K297 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Colgalt1Q8K297 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Colgalt1Q8K297 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Colgalt1Q8K297 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Colgalt1Q8K297 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Colgalt1Q8K297 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Colgalt1Q8K297 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Colgalt1Q8K297 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Colgalt1Q8K297 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Colgalt1Q8K297 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Colgalt1Q8K297 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Colgalt1Q8K297 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Colgalt1Q8K297 Gm7514-201ENSMUST00000209475 934 ntBASIC21.1■□□□□ 0.97
Colgalt1Q8K297 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Colgalt1Q8K297 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC21.1■□□□□ 0.97
Colgalt1Q8K297 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Colgalt1Q8K297 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Colgalt1Q8K297 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Colgalt1Q8K297 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Colgalt1Q8K297 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Colgalt1Q8K297 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Colgalt1Q8K297 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Colgalt1Q8K297 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Colgalt1Q8K297 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Colgalt1Q8K297 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC21.09■□□□□ 0.97
Colgalt1Q8K297 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms