Protein–RNA interactions for Protein: Q8K0T0

Rtn1, Reticulon-1, mousemouse

Predictions only

Length 780 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1Q8K0T0 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC22.72■■□□□ 1.23
Rtn1Q8K0T0 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Rtn1Q8K0T0 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Rtn1Q8K0T0 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC22.72■■□□□ 1.23
Rtn1Q8K0T0 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Rtn1Q8K0T0 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Rtn1Q8K0T0 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC22.72■■□□□ 1.23
Rtn1Q8K0T0 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC22.71■■□□□ 1.23
Rtn1Q8K0T0 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Rtn1Q8K0T0 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Rtn1Q8K0T0 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
Rtn1Q8K0T0 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC22.71■■□□□ 1.23
Rtn1Q8K0T0 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC22.71■■□□□ 1.23
Rtn1Q8K0T0 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Rtn1Q8K0T0 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC22.71■■□□□ 1.23
Rtn1Q8K0T0 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Rtn1Q8K0T0 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Rtn1Q8K0T0 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Rtn1Q8K0T0 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Rtn1Q8K0T0 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC22.7■■□□□ 1.23
Rtn1Q8K0T0 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.23
Rtn1Q8K0T0 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Rtn1Q8K0T0 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
Rtn1Q8K0T0 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
Rtn1Q8K0T0 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC22.7■■□□□ 1.22
Rtn1Q8K0T0 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Rtn1Q8K0T0 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Rtn1Q8K0T0 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC22.7■■□□□ 1.22
Rtn1Q8K0T0 Gm8493-201ENSMUST00000196881 489 ntBASIC22.7■■□□□ 1.22
Rtn1Q8K0T0 Wdr70-203ENSMUST00000227371 1130 ntBASIC22.7■■□□□ 1.22
Rtn1Q8K0T0 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Rtn1Q8K0T0 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
Rtn1Q8K0T0 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
Rtn1Q8K0T0 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
Rtn1Q8K0T0 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC22.69■■□□□ 1.22
Rtn1Q8K0T0 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC22.69■■□□□ 1.22
Rtn1Q8K0T0 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Rtn1Q8K0T0 Gm43173-201ENSMUST00000202246 593 ntBASIC22.69■■□□□ 1.22
Rtn1Q8K0T0 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC22.69■■□□□ 1.22
Rtn1Q8K0T0 Gm6139-201ENSMUST00000079261 882 ntBASIC22.69■■□□□ 1.22
Rtn1Q8K0T0 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Rtn1Q8K0T0 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Rtn1Q8K0T0 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Rtn1Q8K0T0 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC22.68■■□□□ 1.22
Rtn1Q8K0T0 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC22.68■■□□□ 1.22
Rtn1Q8K0T0 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Rtn1Q8K0T0 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Rtn1Q8K0T0 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Rtn1Q8K0T0 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Rtn1Q8K0T0 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Rtn1Q8K0T0 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Rtn1Q8K0T0 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Rtn1Q8K0T0 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Rtn1Q8K0T0 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC22.67■■□□□ 1.22
Rtn1Q8K0T0 AA386476-201ENSMUST00000098781 1665 ntBASIC22.67■■□□□ 1.22
Rtn1Q8K0T0 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Rtn1Q8K0T0 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC22.67■■□□□ 1.22
Rtn1Q8K0T0 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC22.66■■□□□ 1.22
Rtn1Q8K0T0 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
Rtn1Q8K0T0 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Rtn1Q8K0T0 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Rtn1Q8K0T0 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Rtn1Q8K0T0 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Rtn1Q8K0T0 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Rtn1Q8K0T0 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Rtn1Q8K0T0 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Rtn1Q8K0T0 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Rtn1Q8K0T0 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Rtn1Q8K0T0 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC22.65■■□□□ 1.22
Rtn1Q8K0T0 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC22.65■■□□□ 1.22
Rtn1Q8K0T0 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Rtn1Q8K0T0 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
Rtn1Q8K0T0 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Rtn1Q8K0T0 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Rtn1Q8K0T0 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Rtn1Q8K0T0 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC22.64■■□□□ 1.22
Rtn1Q8K0T0 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Rtn1Q8K0T0 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC22.64■■□□□ 1.21
Rtn1Q8K0T0 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Rtn1Q8K0T0 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC22.64■■□□□ 1.21
Rtn1Q8K0T0 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC22.63■■□□□ 1.21
Rtn1Q8K0T0 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Rtn1Q8K0T0 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
Rtn1Q8K0T0 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC22.63■■□□□ 1.21
Rtn1Q8K0T0 AC165080.2-201ENSMUST00000217491 1530 ntBASIC22.63■■□□□ 1.21
Rtn1Q8K0T0 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Rtn1Q8K0T0 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC22.63■■□□□ 1.21
Rtn1Q8K0T0 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Rtn1Q8K0T0 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC22.62■■□□□ 1.21
Rtn1Q8K0T0 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Rtn1Q8K0T0 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Rtn1Q8K0T0 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Rtn1Q8K0T0 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Rtn1Q8K0T0 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC22.62■■□□□ 1.21
Rtn1Q8K0T0 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Rtn1Q8K0T0 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Rtn1Q8K0T0 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Rtn1Q8K0T0 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
Rtn1Q8K0T0 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Rtn1Q8K0T0 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Retrieved 100 of 76,532 protein–RNA pairs in 218.6 ms