Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rfwd3Q8CIK8 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Rfwd3Q8CIK8 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rfwd3Q8CIK8 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rfwd3Q8CIK8 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rfwd3Q8CIK8 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rfwd3Q8CIK8 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rfwd3Q8CIK8 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rfwd3Q8CIK8 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rfwd3Q8CIK8 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rfwd3Q8CIK8 Mir7075-201ENSMUST00000184187 82 ntBASIC18.38■□□□□ 0.53
Rfwd3Q8CIK8 Spcs1-204ENSMUST00000226782 949 ntBASIC18.38■□□□□ 0.53
Rfwd3Q8CIK8 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Rfwd3Q8CIK8 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rfwd3Q8CIK8 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Rfwd3Q8CIK8 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rfwd3Q8CIK8 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rfwd3Q8CIK8 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
Rfwd3Q8CIK8 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rfwd3Q8CIK8 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rfwd3Q8CIK8 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rfwd3Q8CIK8 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
Rfwd3Q8CIK8 Gm7160-202ENSMUST00000188519 1027 ntBASIC18.37■□□□□ 0.53
Rfwd3Q8CIK8 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Rfwd3Q8CIK8 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC18.37■□□□□ 0.53
Rfwd3Q8CIK8 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rfwd3Q8CIK8 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rfwd3Q8CIK8 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Rfwd3Q8CIK8 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rfwd3Q8CIK8 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rfwd3Q8CIK8 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rfwd3Q8CIK8 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rfwd3Q8CIK8 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rfwd3Q8CIK8 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rfwd3Q8CIK8 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rfwd3Q8CIK8 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Rfwd3Q8CIK8 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rfwd3Q8CIK8 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rfwd3Q8CIK8 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC18.36■□□□□ 0.53
Rfwd3Q8CIK8 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
Rfwd3Q8CIK8 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Rfwd3Q8CIK8 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Rfwd3Q8CIK8 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rfwd3Q8CIK8 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rfwd3Q8CIK8 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
Rfwd3Q8CIK8 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Rfwd3Q8CIK8 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Rfwd3Q8CIK8 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Rfwd3Q8CIK8 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC18.35■□□□□ 0.53
Rfwd3Q8CIK8 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rfwd3Q8CIK8 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Rfwd3Q8CIK8 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rfwd3Q8CIK8 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rfwd3Q8CIK8 Gm12251-201ENSMUST00000117893 792 ntBASIC18.35■□□□□ 0.53
Rfwd3Q8CIK8 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Rfwd3Q8CIK8 Wdr70-203ENSMUST00000227371 1130 ntBASIC18.35■□□□□ 0.53
Rfwd3Q8CIK8 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC18.35■□□□□ 0.53
Rfwd3Q8CIK8 Gm6139-201ENSMUST00000079261 882 ntBASIC18.35■□□□□ 0.53
Rfwd3Q8CIK8 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rfwd3Q8CIK8 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Rfwd3Q8CIK8 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Rfwd3Q8CIK8 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Rfwd3Q8CIK8 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Rfwd3Q8CIK8 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rfwd3Q8CIK8 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rfwd3Q8CIK8 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rfwd3Q8CIK8 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Rfwd3Q8CIK8 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Rfwd3Q8CIK8 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC18.34■□□□□ 0.53
Rfwd3Q8CIK8 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
Rfwd3Q8CIK8 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rfwd3Q8CIK8 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rfwd3Q8CIK8 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rfwd3Q8CIK8 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Rfwd3Q8CIK8 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rfwd3Q8CIK8 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rfwd3Q8CIK8 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rfwd3Q8CIK8 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC18.33■□□□□ 0.53
Rfwd3Q8CIK8 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rfwd3Q8CIK8 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rfwd3Q8CIK8 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rfwd3Q8CIK8 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC18.33■□□□□ 0.52
Rfwd3Q8CIK8 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Rfwd3Q8CIK8 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rfwd3Q8CIK8 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Rfwd3Q8CIK8 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rfwd3Q8CIK8 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.33■□□□□ 0.52
Rfwd3Q8CIK8 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Rfwd3Q8CIK8 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rfwd3Q8CIK8 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rfwd3Q8CIK8 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rfwd3Q8CIK8 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rfwd3Q8CIK8 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC18.32■□□□□ 0.52
Rfwd3Q8CIK8 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Rfwd3Q8CIK8 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC18.32■□□□□ 0.52
Rfwd3Q8CIK8 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rfwd3Q8CIK8 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rfwd3Q8CIK8 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC18.32■□□□□ 0.52
Rfwd3Q8CIK8 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rfwd3Q8CIK8 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms