Protein–RNA interactions for Protein: Q8CI51

Pdlim5, PDZ and LIM domain protein 5, mousemouse

Known RBP Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5Q8CI51 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pdlim5Q8CI51 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Pdlim5Q8CI51 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pdlim5Q8CI51 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pdlim5Q8CI51 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC18.07■□□□□ 0.48
Pdlim5Q8CI51 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pdlim5Q8CI51 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
Pdlim5Q8CI51 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Pdlim5Q8CI51 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Pdlim5Q8CI51 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC18.06■□□□□ 0.48
Pdlim5Q8CI51 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Pdlim5Q8CI51 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Pdlim5Q8CI51 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Pdlim5Q8CI51 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pdlim5Q8CI51 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Pdlim5Q8CI51 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pdlim5Q8CI51 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pdlim5Q8CI51 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Pdlim5Q8CI51 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC18.05■□□□□ 0.48
Pdlim5Q8CI51 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pdlim5Q8CI51 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC18.05■□□□□ 0.48
Pdlim5Q8CI51 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC18.05■□□□□ 0.48
Pdlim5Q8CI51 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pdlim5Q8CI51 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pdlim5Q8CI51 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Pdlim5Q8CI51 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pdlim5Q8CI51 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Pdlim5Q8CI51 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Pdlim5Q8CI51 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC18.04■□□□□ 0.48
Pdlim5Q8CI51 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pdlim5Q8CI51 Gm27045-201ENSMUST00000182145 1402 ntBASIC18.04■□□□□ 0.48
Pdlim5Q8CI51 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Pdlim5Q8CI51 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pdlim5Q8CI51 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC18.03■□□□□ 0.48
Pdlim5Q8CI51 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Pdlim5Q8CI51 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pdlim5Q8CI51 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Pdlim5Q8CI51 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pdlim5Q8CI51 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
Pdlim5Q8CI51 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Pdlim5Q8CI51 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC18.03■□□□□ 0.48
Pdlim5Q8CI51 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Pdlim5Q8CI51 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pdlim5Q8CI51 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pdlim5Q8CI51 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pdlim5Q8CI51 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC18.02■□□□□ 0.48
Pdlim5Q8CI51 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pdlim5Q8CI51 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC18.02■□□□□ 0.48
Pdlim5Q8CI51 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pdlim5Q8CI51 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pdlim5Q8CI51 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pdlim5Q8CI51 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pdlim5Q8CI51 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pdlim5Q8CI51 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Pdlim5Q8CI51 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
Pdlim5Q8CI51 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC18.01■□□□□ 0.47
Pdlim5Q8CI51 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pdlim5Q8CI51 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pdlim5Q8CI51 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pdlim5Q8CI51 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Pdlim5Q8CI51 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pdlim5Q8CI51 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pdlim5Q8CI51 Gm8770-201ENSMUST00000121113 1109 ntBASIC18.01■□□□□ 0.47
Pdlim5Q8CI51 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pdlim5Q8CI51 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pdlim5Q8CI51 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pdlim5Q8CI51 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pdlim5Q8CI51 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pdlim5Q8CI51 Golph3-205ENSMUST00000228671 2842 ntBASIC18.01■□□□□ 0.47
Pdlim5Q8CI51 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Pdlim5Q8CI51 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pdlim5Q8CI51 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
Pdlim5Q8CI51 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pdlim5Q8CI51 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pdlim5Q8CI51 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC18■□□□□ 0.47
Pdlim5Q8CI51 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC18■□□□□ 0.47
Pdlim5Q8CI51 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Pdlim5Q8CI51 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pdlim5Q8CI51 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Pdlim5Q8CI51 Gm43759-201ENSMUST00000196925 1261 ntBASIC18■□□□□ 0.47
Pdlim5Q8CI51 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC18■□□□□ 0.47
Pdlim5Q8CI51 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pdlim5Q8CI51 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pdlim5Q8CI51 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Pdlim5Q8CI51 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Pdlim5Q8CI51 Gm6085-201ENSMUST00000182774 1470 ntBASIC18■□□□□ 0.47
Pdlim5Q8CI51 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC18■□□□□ 0.47
Pdlim5Q8CI51 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC18■□□□□ 0.47
Pdlim5Q8CI51 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
Pdlim5Q8CI51 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pdlim5Q8CI51 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC17.99■□□□□ 0.47
Pdlim5Q8CI51 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pdlim5Q8CI51 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pdlim5Q8CI51 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC17.99■□□□□ 0.47
Pdlim5Q8CI51 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pdlim5Q8CI51 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC17.99■□□□□ 0.47
Pdlim5Q8CI51 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pdlim5Q8CI51 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pdlim5Q8CI51 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pdlim5Q8CI51 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms