Protein–RNA interactions for Protein: Q8CG50

Rab43, Ras-related protein Rab-43, mousemouse

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab43Q8CG50 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rab43Q8CG50 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Rab43Q8CG50 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC19.2■□□□□ 0.66
Rab43Q8CG50 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rab43Q8CG50 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rab43Q8CG50 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rab43Q8CG50 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rab43Q8CG50 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Rab43Q8CG50 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rab43Q8CG50 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Rab43Q8CG50 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC19.19■□□□□ 0.66
Rab43Q8CG50 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC19.19■□□□□ 0.66
Rab43Q8CG50 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rab43Q8CG50 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rab43Q8CG50 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rab43Q8CG50 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rab43Q8CG50 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Rab43Q8CG50 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Rab43Q8CG50 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rab43Q8CG50 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rab43Q8CG50 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rab43Q8CG50 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rab43Q8CG50 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rab43Q8CG50 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rab43Q8CG50 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rab43Q8CG50 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Rab43Q8CG50 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Rab43Q8CG50 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC19.17■□□□□ 0.66
Rab43Q8CG50 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rab43Q8CG50 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rab43Q8CG50 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC19.16■□□□□ 0.66
Rab43Q8CG50 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rab43Q8CG50 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Rab43Q8CG50 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Rab43Q8CG50 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.15■□□□□ 0.66
Rab43Q8CG50 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Rab43Q8CG50 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rab43Q8CG50 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rab43Q8CG50 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Rab43Q8CG50 Gm7514-201ENSMUST00000209475 934 ntBASIC19.15■□□□□ 0.66
Rab43Q8CG50 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rab43Q8CG50 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rab43Q8CG50 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Rab43Q8CG50 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rab43Q8CG50 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rab43Q8CG50 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Rab43Q8CG50 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Rab43Q8CG50 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rab43Q8CG50 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
Rab43Q8CG50 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC19.14■□□□□ 0.65
Rab43Q8CG50 Ap3s1-204ENSMUST00000225520 957 ntBASIC19.14■□□□□ 0.65
Rab43Q8CG50 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rab43Q8CG50 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Rab43Q8CG50 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rab43Q8CG50 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Rab43Q8CG50 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rab43Q8CG50 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rab43Q8CG50 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Rab43Q8CG50 Gm27011-201ENSMUST00000182352 972 ntBASIC19.13■□□□□ 0.65
Rab43Q8CG50 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rab43Q8CG50 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rab43Q8CG50 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rab43Q8CG50 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rab43Q8CG50 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rab43Q8CG50 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Rab43Q8CG50 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rab43Q8CG50 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rab43Q8CG50 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rab43Q8CG50 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rab43Q8CG50 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC19.12■□□□□ 0.65
Rab43Q8CG50 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Rab43Q8CG50 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC19.12■□□□□ 0.65
Rab43Q8CG50 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC19.12■□□□□ 0.65
Rab43Q8CG50 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rab43Q8CG50 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Rab43Q8CG50 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rab43Q8CG50 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rab43Q8CG50 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rab43Q8CG50 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rab43Q8CG50 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rab43Q8CG50 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC19.11■□□□□ 0.65
Rab43Q8CG50 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rab43Q8CG50 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rab43Q8CG50 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rab43Q8CG50 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.11■□□□□ 0.65
Rab43Q8CG50 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Rab43Q8CG50 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rab43Q8CG50 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC19.11■□□□□ 0.65
Rab43Q8CG50 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Rab43Q8CG50 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
Rab43Q8CG50 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Rab43Q8CG50 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rab43Q8CG50 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC19.1■□□□□ 0.65
Rab43Q8CG50 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.1■□□□□ 0.65
Rab43Q8CG50 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC19.1■□□□□ 0.65
Rab43Q8CG50 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rab43Q8CG50 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Rab43Q8CG50 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rab43Q8CG50 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC19.1■□□□□ 0.65
Rab43Q8CG50 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms