Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC24.41■■□□□ 1.5
Smc5Q8CG46 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC24.41■■□□□ 1.5
Smc5Q8CG46 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Smc5Q8CG46 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Smc5Q8CG46 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC24.41■■□□□ 1.5
Smc5Q8CG46 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Smc5Q8CG46 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Smc5Q8CG46 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Smc5Q8CG46 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC24.4■■□□□ 1.5
Smc5Q8CG46 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Smc5Q8CG46 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Smc5Q8CG46 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
Smc5Q8CG46 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC24.39■■□□□ 1.5
Smc5Q8CG46 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC24.39■■□□□ 1.5
Smc5Q8CG46 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC24.39■■□□□ 1.5
Smc5Q8CG46 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC24.39■■□□□ 1.5
Smc5Q8CG46 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.49
Smc5Q8CG46 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC24.39■■□□□ 1.49
Smc5Q8CG46 Etf1-202ENSMUST00000180351 108 ntBASIC24.39■■□□□ 1.49
Smc5Q8CG46 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Smc5Q8CG46 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC24.39■■□□□ 1.49
Smc5Q8CG46 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC24.39■■□□□ 1.49
Smc5Q8CG46 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC24.39■■□□□ 1.49
Smc5Q8CG46 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Smc5Q8CG46 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Smc5Q8CG46 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Smc5Q8CG46 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Smc5Q8CG46 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
Smc5Q8CG46 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC24.38■■□□□ 1.49
Smc5Q8CG46 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
Smc5Q8CG46 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC24.38■■□□□ 1.49
Smc5Q8CG46 Gm27045-201ENSMUST00000182145 1402 ntBASIC24.37■■□□□ 1.49
Smc5Q8CG46 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Smc5Q8CG46 Gm6085-201ENSMUST00000182774 1470 ntBASIC24.37■■□□□ 1.49
Smc5Q8CG46 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
Smc5Q8CG46 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC24.36■■□□□ 1.49
Smc5Q8CG46 Gm45640-201ENSMUST00000210665 1896 ntBASIC24.36■■□□□ 1.49
Smc5Q8CG46 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Smc5Q8CG46 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Smc5Q8CG46 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Smc5Q8CG46 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC24.36■■□□□ 1.49
Smc5Q8CG46 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC24.36■■□□□ 1.49
Smc5Q8CG46 AA386476-201ENSMUST00000098781 1665 ntBASIC24.36■■□□□ 1.49
Smc5Q8CG46 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC24.36■■□□□ 1.49
Smc5Q8CG46 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Smc5Q8CG46 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC24.35■■□□□ 1.49
Smc5Q8CG46 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC24.35■■□□□ 1.49
Smc5Q8CG46 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Smc5Q8CG46 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC24.35■■□□□ 1.49
Smc5Q8CG46 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Smc5Q8CG46 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC24.35■■□□□ 1.49
Smc5Q8CG46 Gm42501-201ENSMUST00000200220 1026 ntBASIC24.35■■□□□ 1.49
Smc5Q8CG46 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Smc5Q8CG46 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Smc5Q8CG46 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Smc5Q8CG46 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC24.34■■□□□ 1.49
Smc5Q8CG46 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC24.34■■□□□ 1.49
Smc5Q8CG46 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC24.34■■□□□ 1.49
Smc5Q8CG46 AC126028.2-201ENSMUST00000228100 1833 ntBASIC24.34■■□□□ 1.49
Smc5Q8CG46 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC24.34■■□□□ 1.49
Smc5Q8CG46 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Smc5Q8CG46 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Smc5Q8CG46 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Smc5Q8CG46 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Smc5Q8CG46 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Smc5Q8CG46 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Smc5Q8CG46 Gm5522-201ENSMUST00000189483 1242 ntBASIC24.33■■□□□ 1.49
Smc5Q8CG46 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC24.33■■□□□ 1.49
Smc5Q8CG46 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Smc5Q8CG46 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC24.33■■□□□ 1.48
Smc5Q8CG46 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC24.32■■□□□ 1.48
Smc5Q8CG46 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC24.32■■□□□ 1.48
Smc5Q8CG46 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Smc5Q8CG46 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC24.32■■□□□ 1.48
Smc5Q8CG46 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC24.32■■□□□ 1.48
Smc5Q8CG46 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Smc5Q8CG46 Gm43231-201ENSMUST00000202960 2258 ntBASIC24.32■■□□□ 1.48
Smc5Q8CG46 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Smc5Q8CG46 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
Smc5Q8CG46 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Smc5Q8CG46 Gm7417-201ENSMUST00000192950 473 ntBASIC24.31■■□□□ 1.48
Smc5Q8CG46 Gm15820-201ENSMUST00000201566 728 ntBASIC24.31■■□□□ 1.48
Smc5Q8CG46 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Smc5Q8CG46 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC24.31■■□□□ 1.48
Smc5Q8CG46 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Smc5Q8CG46 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC24.3■■□□□ 1.48
Smc5Q8CG46 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Smc5Q8CG46 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Smc5Q8CG46 AC124603.1-201ENSMUST00000223843 308 ntBASIC24.3■■□□□ 1.48
Smc5Q8CG46 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Smc5Q8CG46 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC24.3■■□□□ 1.48
Smc5Q8CG46 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
Smc5Q8CG46 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Smc5Q8CG46 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Smc5Q8CG46 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Smc5Q8CG46 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Smc5Q8CG46 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Smc5Q8CG46 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC24.29■■□□□ 1.48
Smc5Q8CG46 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC24.29■■□□□ 1.48
Smc5Q8CG46 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Retrieved 100 of 76,532 protein–RNA pairs in 121.5 ms