Protein–RNA interactions for Protein: Q8CDV4

Trim52, Tripartite motif-containing 52, mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim52Q8CDV4 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Trim52Q8CDV4 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Trim52Q8CDV4 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC24.53■■□□□ 1.52
Trim52Q8CDV4 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Trim52Q8CDV4 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Trim52Q8CDV4 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Trim52Q8CDV4 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Trim52Q8CDV4 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC24.52■■□□□ 1.52
Trim52Q8CDV4 Gm7514-201ENSMUST00000209475 934 ntBASIC24.52■■□□□ 1.52
Trim52Q8CDV4 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC24.52■■□□□ 1.52
Trim52Q8CDV4 CT025689.6-201ENSMUST00000224991 1104 ntBASIC24.52■■□□□ 1.52
Trim52Q8CDV4 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC24.52■■□□□ 1.52
Trim52Q8CDV4 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC24.52■■□□□ 1.52
Trim52Q8CDV4 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC24.52■■□□□ 1.52
Trim52Q8CDV4 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Trim52Q8CDV4 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
Trim52Q8CDV4 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Trim52Q8CDV4 Gm43909-201ENSMUST00000203443 1876 ntBASIC24.51■■□□□ 1.51
Trim52Q8CDV4 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Trim52Q8CDV4 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC24.51■■□□□ 1.51
Trim52Q8CDV4 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC24.51■■□□□ 1.51
Trim52Q8CDV4 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC24.51■■□□□ 1.51
Trim52Q8CDV4 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Trim52Q8CDV4 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC24.51■■□□□ 1.51
Trim52Q8CDV4 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC24.51■■□□□ 1.51
Trim52Q8CDV4 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Trim52Q8CDV4 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
Trim52Q8CDV4 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Trim52Q8CDV4 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
Trim52Q8CDV4 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC24.5■■□□□ 1.51
Trim52Q8CDV4 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC24.5■■□□□ 1.51
Trim52Q8CDV4 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
Trim52Q8CDV4 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Trim52Q8CDV4 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC24.5■■□□□ 1.51
Trim52Q8CDV4 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC24.5■■□□□ 1.51
Trim52Q8CDV4 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC24.49■■□□□ 1.51
Trim52Q8CDV4 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Trim52Q8CDV4 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC24.49■■□□□ 1.51
Trim52Q8CDV4 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Trim52Q8CDV4 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Trim52Q8CDV4 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC24.49■■□□□ 1.51
Trim52Q8CDV4 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Trim52Q8CDV4 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC24.49■■□□□ 1.51
Trim52Q8CDV4 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC24.49■■□□□ 1.51
Trim52Q8CDV4 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Trim52Q8CDV4 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Trim52Q8CDV4 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC24.49■■□□□ 1.51
Trim52Q8CDV4 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Trim52Q8CDV4 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Trim52Q8CDV4 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Trim52Q8CDV4 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
Trim52Q8CDV4 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
Trim52Q8CDV4 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
Trim52Q8CDV4 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC24.49■■□□□ 1.51
Trim52Q8CDV4 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC24.49■■□□□ 1.51
Trim52Q8CDV4 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
Trim52Q8CDV4 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC24.48■■□□□ 1.51
Trim52Q8CDV4 CT010467.1-202ENSMUST00000205406 714 ntBASIC24.48■■□□□ 1.51
Trim52Q8CDV4 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC24.48■■□□□ 1.51
Trim52Q8CDV4 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
Trim52Q8CDV4 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC24.48■■□□□ 1.51
Trim52Q8CDV4 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Trim52Q8CDV4 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Trim52Q8CDV4 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC24.47■■□□□ 1.51
Trim52Q8CDV4 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC24.47■■□□□ 1.51
Trim52Q8CDV4 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Trim52Q8CDV4 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC24.47■■□□□ 1.51
Trim52Q8CDV4 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC24.47■■□□□ 1.51
Trim52Q8CDV4 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Trim52Q8CDV4 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Trim52Q8CDV4 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Trim52Q8CDV4 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Trim52Q8CDV4 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC24.46■■□□□ 1.51
Trim52Q8CDV4 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC24.46■■□□□ 1.51
Trim52Q8CDV4 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC24.46■■□□□ 1.51
Trim52Q8CDV4 Gm38205-201ENSMUST00000192243 258 ntBASIC24.46■■□□□ 1.51
Trim52Q8CDV4 Spcs1-207ENSMUST00000228767 1008 ntBASIC24.46■■□□□ 1.51
Trim52Q8CDV4 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
Trim52Q8CDV4 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC24.46■■□□□ 1.51
Trim52Q8CDV4 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.51
Trim52Q8CDV4 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
Trim52Q8CDV4 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC24.45■■□□□ 1.51
Trim52Q8CDV4 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC24.45■■□□□ 1.51
Trim52Q8CDV4 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC24.45■■□□□ 1.5
Trim52Q8CDV4 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC24.45■■□□□ 1.5
Trim52Q8CDV4 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Trim52Q8CDV4 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Trim52Q8CDV4 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Trim52Q8CDV4 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC24.45■■□□□ 1.5
Trim52Q8CDV4 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC24.45■■□□□ 1.5
Trim52Q8CDV4 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Trim52Q8CDV4 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC24.45■■□□□ 1.5
Trim52Q8CDV4 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.5
Trim52Q8CDV4 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.5
Trim52Q8CDV4 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC24.44■■□□□ 1.5
Trim52Q8CDV4 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC24.44■■□□□ 1.5
Trim52Q8CDV4 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC24.44■■□□□ 1.5
Trim52Q8CDV4 Gm10602-201ENSMUST00000098239 609 ntBASIC24.44■■□□□ 1.5
Trim52Q8CDV4 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Trim52Q8CDV4 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Retrieved 100 of 76,532 protein–RNA pairs in 109.3 ms