Protein–RNA interactions for Protein: Q8CCS6

Pabpn1, Polyadenylate-binding protein 2, mousemouse

Known RBP Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpn1Q8CCS6 Dio3-201ENSMUST00000097228 1449 ntBASIC31.24■■■□□ 2.59
Pabpn1Q8CCS6 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
Pabpn1Q8CCS6 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC31.23■■■□□ 2.59
Pabpn1Q8CCS6 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
Pabpn1Q8CCS6 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC31.23■■■□□ 2.59
Pabpn1Q8CCS6 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC31.23■■■□□ 2.59
Pabpn1Q8CCS6 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
Pabpn1Q8CCS6 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
Pabpn1Q8CCS6 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
Pabpn1Q8CCS6 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC31.22■■■□□ 2.59
Pabpn1Q8CCS6 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC31.22■■■□□ 2.59
Pabpn1Q8CCS6 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
Pabpn1Q8CCS6 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC31.22■■■□□ 2.59
Pabpn1Q8CCS6 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC31.22■■■□□ 2.59
Pabpn1Q8CCS6 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
Pabpn1Q8CCS6 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
Pabpn1Q8CCS6 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
Pabpn1Q8CCS6 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC31.21■■■□□ 2.59
Pabpn1Q8CCS6 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
Pabpn1Q8CCS6 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
Pabpn1Q8CCS6 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC31.21■■■□□ 2.59
Pabpn1Q8CCS6 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC31.21■■■□□ 2.59
Pabpn1Q8CCS6 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC31.2■■■□□ 2.59
Pabpn1Q8CCS6 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC31.2■■■□□ 2.59
Pabpn1Q8CCS6 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
Pabpn1Q8CCS6 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC31.2■■■□□ 2.59
Pabpn1Q8CCS6 Gm18666-201ENSMUST00000190039 958 ntBASIC31.2■■■□□ 2.59
Pabpn1Q8CCS6 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC31.2■■■□□ 2.59
Pabpn1Q8CCS6 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC31.2■■■□□ 2.58
Pabpn1Q8CCS6 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
Pabpn1Q8CCS6 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
Pabpn1Q8CCS6 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
Pabpn1Q8CCS6 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC31.19■■■□□ 2.58
Pabpn1Q8CCS6 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
Pabpn1Q8CCS6 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
Pabpn1Q8CCS6 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC31.19■■■□□ 2.58
Pabpn1Q8CCS6 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC31.19■■■□□ 2.58
Pabpn1Q8CCS6 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
Pabpn1Q8CCS6 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
Pabpn1Q8CCS6 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
Pabpn1Q8CCS6 Gm6728-201ENSMUST00000178117 1065 ntBASIC31.18■■■□□ 2.58
Pabpn1Q8CCS6 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
Pabpn1Q8CCS6 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
Pabpn1Q8CCS6 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC31.17■■■□□ 2.58
Pabpn1Q8CCS6 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC31.17■■■□□ 2.58
Pabpn1Q8CCS6 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC31.17■■■□□ 2.58
Pabpn1Q8CCS6 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
Pabpn1Q8CCS6 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC31.17■■■□□ 2.58
Pabpn1Q8CCS6 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC31.17■■■□□ 2.58
Pabpn1Q8CCS6 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC31.17■■■□□ 2.58
Pabpn1Q8CCS6 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
Pabpn1Q8CCS6 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
Pabpn1Q8CCS6 Nrn1-203ENSMUST00000223611 1443 ntBASIC31.16■■■□□ 2.58
Pabpn1Q8CCS6 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC31.16■■■□□ 2.58
Pabpn1Q8CCS6 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
Pabpn1Q8CCS6 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC31.16■■■□□ 2.58
Pabpn1Q8CCS6 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
Pabpn1Q8CCS6 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
Pabpn1Q8CCS6 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC31.16■■■□□ 2.58
Pabpn1Q8CCS6 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
Pabpn1Q8CCS6 AC153890.1-201ENSMUST00000220021 2469 ntBASIC31.16■■■□□ 2.58
Pabpn1Q8CCS6 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
Pabpn1Q8CCS6 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
Pabpn1Q8CCS6 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC31.15■■■□□ 2.58
Pabpn1Q8CCS6 Gm15378-201ENSMUST00000121894 207 ntBASIC31.15■■■□□ 2.58
Pabpn1Q8CCS6 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
Pabpn1Q8CCS6 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC31.15■■■□□ 2.58
Pabpn1Q8CCS6 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
Pabpn1Q8CCS6 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
Pabpn1Q8CCS6 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
Pabpn1Q8CCS6 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
Pabpn1Q8CCS6 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC31.14■■■□□ 2.57
Pabpn1Q8CCS6 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC31.13■■■□□ 2.57
Pabpn1Q8CCS6 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
Pabpn1Q8CCS6 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
Pabpn1Q8CCS6 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
Pabpn1Q8CCS6 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC31.12■■■□□ 2.57
Pabpn1Q8CCS6 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC31.11■■■□□ 2.57
Pabpn1Q8CCS6 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC31.11■■■□□ 2.57
Pabpn1Q8CCS6 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC31.11■■■□□ 2.57
Pabpn1Q8CCS6 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
Pabpn1Q8CCS6 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC31.11■■■□□ 2.57
Pabpn1Q8CCS6 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
Pabpn1Q8CCS6 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
Pabpn1Q8CCS6 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
Pabpn1Q8CCS6 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC31.11■■■□□ 2.57
Pabpn1Q8CCS6 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
Pabpn1Q8CCS6 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
Pabpn1Q8CCS6 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
Pabpn1Q8CCS6 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
Pabpn1Q8CCS6 Gm10167-201ENSMUST00000150411 1479 ntBASIC31.1■■■□□ 2.57
Pabpn1Q8CCS6 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
Pabpn1Q8CCS6 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC31.1■■■□□ 2.57
Pabpn1Q8CCS6 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC31.1■■■□□ 2.57
Pabpn1Q8CCS6 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
Pabpn1Q8CCS6 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
Pabpn1Q8CCS6 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC31.09■■■□□ 2.57
Pabpn1Q8CCS6 CT010444.2-201ENSMUST00000217877 1629 ntBASIC31.09■■■□□ 2.57
Pabpn1Q8CCS6 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC31.09■■■□□ 2.57
Pabpn1Q8CCS6 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC31.09■■■□□ 2.57
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms