Protein–RNA interactions for Protein: Q8CC35

Synpo, Synaptopodin, mousemouse

Known RBP Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynpoQ8CC35 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SynpoQ8CC35 Gm43530-201ENSMUST00000195920 274 ntBASIC18.91■□□□□ 0.62
SynpoQ8CC35 Gm43017-201ENSMUST00000198296 752 ntBASIC18.91■□□□□ 0.62
SynpoQ8CC35 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SynpoQ8CC35 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SynpoQ8CC35 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC18.91■□□□□ 0.62
SynpoQ8CC35 Golph3-202ENSMUST00000226517 2359 ntBASIC18.9■□□□□ 0.62
SynpoQ8CC35 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SynpoQ8CC35 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SynpoQ8CC35 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SynpoQ8CC35 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SynpoQ8CC35 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SynpoQ8CC35 AC166356.1-201ENSMUST00000228236 1426 ntBASIC18.9■□□□□ 0.62
SynpoQ8CC35 Gm37035-201ENSMUST00000194809 2148 ntBASIC18.89■□□□□ 0.62
SynpoQ8CC35 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
SynpoQ8CC35 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SynpoQ8CC35 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC18.89■□□□□ 0.61
SynpoQ8CC35 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SynpoQ8CC35 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SynpoQ8CC35 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
SynpoQ8CC35 Gm21168-201ENSMUST00000199646 1096 ntBASIC18.89■□□□□ 0.61
SynpoQ8CC35 Gm2011-201ENSMUST00000203124 1263 ntBASIC18.89■□□□□ 0.61
SynpoQ8CC35 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
SynpoQ8CC35 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SynpoQ8CC35 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
SynpoQ8CC35 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.61
SynpoQ8CC35 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
SynpoQ8CC35 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
SynpoQ8CC35 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SynpoQ8CC35 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC18.88■□□□□ 0.61
SynpoQ8CC35 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
SynpoQ8CC35 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SynpoQ8CC35 Flvcr1-202ENSMUST00000191946 1216 ntBASIC18.88■□□□□ 0.61
SynpoQ8CC35 Wdr70-203ENSMUST00000227371 1130 ntBASIC18.88■□□□□ 0.61
SynpoQ8CC35 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SynpoQ8CC35 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
SynpoQ8CC35 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
SynpoQ8CC35 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SynpoQ8CC35 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SynpoQ8CC35 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.87■□□□□ 0.61
SynpoQ8CC35 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
SynpoQ8CC35 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
SynpoQ8CC35 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
SynpoQ8CC35 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC18.87■□□□□ 0.61
SynpoQ8CC35 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SynpoQ8CC35 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SynpoQ8CC35 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SynpoQ8CC35 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SynpoQ8CC35 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
SynpoQ8CC35 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC18.86■□□□□ 0.61
SynpoQ8CC35 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SynpoQ8CC35 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SynpoQ8CC35 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SynpoQ8CC35 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
SynpoQ8CC35 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
SynpoQ8CC35 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SynpoQ8CC35 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SynpoQ8CC35 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC18.86■□□□□ 0.61
SynpoQ8CC35 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC18.86■□□□□ 0.61
SynpoQ8CC35 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
SynpoQ8CC35 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC18.86■□□□□ 0.61
SynpoQ8CC35 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SynpoQ8CC35 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SynpoQ8CC35 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SynpoQ8CC35 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SynpoQ8CC35 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC18.85■□□□□ 0.61
SynpoQ8CC35 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SynpoQ8CC35 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC18.85■□□□□ 0.61
SynpoQ8CC35 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SynpoQ8CC35 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SynpoQ8CC35 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SynpoQ8CC35 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC18.85■□□□□ 0.61
SynpoQ8CC35 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SynpoQ8CC35 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SynpoQ8CC35 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SynpoQ8CC35 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SynpoQ8CC35 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
SynpoQ8CC35 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SynpoQ8CC35 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SynpoQ8CC35 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SynpoQ8CC35 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SynpoQ8CC35 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
SynpoQ8CC35 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SynpoQ8CC35 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SynpoQ8CC35 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SynpoQ8CC35 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
SynpoQ8CC35 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SynpoQ8CC35 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SynpoQ8CC35 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SynpoQ8CC35 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SynpoQ8CC35 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
SynpoQ8CC35 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SynpoQ8CC35 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SynpoQ8CC35 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SynpoQ8CC35 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SynpoQ8CC35 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
SynpoQ8CC35 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SynpoQ8CC35 Gm7160-202ENSMUST00000188519 1027 ntBASIC18.83■□□□□ 0.6
SynpoQ8CC35 Gm8495-201ENSMUST00000188740 694 ntBASIC18.83■□□□□ 0.6
SynpoQ8CC35 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms