Protein–RNA interactions for Protein: Q8C5R8

Prps1l1, Phosphoribosyl pyrophosphate synthetase 1-like 1, mousemouse

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prps1l1Q8C5R8 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Prps1l1Q8C5R8 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Prps1l1Q8C5R8 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Prps1l1Q8C5R8 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC18.19■□□□□ 0.5
Prps1l1Q8C5R8 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Prps1l1Q8C5R8 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Prps1l1Q8C5R8 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Prps1l1Q8C5R8 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC18.18■□□□□ 0.5
Prps1l1Q8C5R8 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Prps1l1Q8C5R8 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Prps1l1Q8C5R8 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Prps1l1Q8C5R8 Gm7160-202ENSMUST00000188519 1027 ntBASIC18.18■□□□□ 0.5
Prps1l1Q8C5R8 Wdr70-203ENSMUST00000227371 1130 ntBASIC18.18■□□□□ 0.5
Prps1l1Q8C5R8 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Prps1l1Q8C5R8 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC18.18■□□□□ 0.5
Prps1l1Q8C5R8 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Prps1l1Q8C5R8 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Prps1l1Q8C5R8 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Prps1l1Q8C5R8 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Prps1l1Q8C5R8 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC18.18■□□□□ 0.5
Prps1l1Q8C5R8 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Prps1l1Q8C5R8 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Prps1l1Q8C5R8 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Prps1l1Q8C5R8 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Prps1l1Q8C5R8 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC18.17■□□□□ 0.5
Prps1l1Q8C5R8 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Prps1l1Q8C5R8 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Prps1l1Q8C5R8 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC18.17■□□□□ 0.5
Prps1l1Q8C5R8 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Prps1l1Q8C5R8 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Prps1l1Q8C5R8 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Prps1l1Q8C5R8 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Prps1l1Q8C5R8 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Prps1l1Q8C5R8 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC18.16■□□□□ 0.5
Prps1l1Q8C5R8 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Prps1l1Q8C5R8 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Prps1l1Q8C5R8 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Prps1l1Q8C5R8 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Prps1l1Q8C5R8 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Prps1l1Q8C5R8 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Prps1l1Q8C5R8 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Prps1l1Q8C5R8 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Prps1l1Q8C5R8 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Prps1l1Q8C5R8 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Prps1l1Q8C5R8 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Prps1l1Q8C5R8 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Prps1l1Q8C5R8 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC18.15■□□□□ 0.5
Prps1l1Q8C5R8 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Prps1l1Q8C5R8 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Prps1l1Q8C5R8 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC18.15■□□□□ 0.5
Prps1l1Q8C5R8 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Prps1l1Q8C5R8 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Prps1l1Q8C5R8 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Prps1l1Q8C5R8 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Prps1l1Q8C5R8 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Prps1l1Q8C5R8 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Prps1l1Q8C5R8 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Prps1l1Q8C5R8 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Prps1l1Q8C5R8 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Prps1l1Q8C5R8 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Prps1l1Q8C5R8 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Prps1l1Q8C5R8 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Prps1l1Q8C5R8 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC18.14■□□□□ 0.49
Prps1l1Q8C5R8 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Prps1l1Q8C5R8 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Prps1l1Q8C5R8 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Prps1l1Q8C5R8 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC18.14■□□□□ 0.49
Prps1l1Q8C5R8 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Prps1l1Q8C5R8 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Prps1l1Q8C5R8 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Prps1l1Q8C5R8 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Prps1l1Q8C5R8 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Prps1l1Q8C5R8 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Prps1l1Q8C5R8 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Prps1l1Q8C5R8 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Prps1l1Q8C5R8 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC18.13■□□□□ 0.49
Prps1l1Q8C5R8 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Prps1l1Q8C5R8 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Prps1l1Q8C5R8 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Prps1l1Q8C5R8 Cdkn3-203ENSMUST00000227149 1952 ntBASIC18.13■□□□□ 0.49
Prps1l1Q8C5R8 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Prps1l1Q8C5R8 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Prps1l1Q8C5R8 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Prps1l1Q8C5R8 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Prps1l1Q8C5R8 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Prps1l1Q8C5R8 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Prps1l1Q8C5R8 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Prps1l1Q8C5R8 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Prps1l1Q8C5R8 Gm43017-201ENSMUST00000198296 752 ntBASIC18.12■□□□□ 0.49
Prps1l1Q8C5R8 Gm6085-201ENSMUST00000182774 1470 ntBASIC18.12■□□□□ 0.49
Prps1l1Q8C5R8 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Prps1l1Q8C5R8 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC18.12■□□□□ 0.49
Prps1l1Q8C5R8 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Prps1l1Q8C5R8 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Prps1l1Q8C5R8 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Prps1l1Q8C5R8 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Prps1l1Q8C5R8 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Prps1l1Q8C5R8 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Prps1l1Q8C5R8 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Prps1l1Q8C5R8 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC18.11■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms