Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Usp44Q8C2S0 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC23.16■■□□□ 1.3
Usp44Q8C2S0 Gm8493-201ENSMUST00000196881 489 ntBASIC23.16■■□□□ 1.3
Usp44Q8C2S0 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Usp44Q8C2S0 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Usp44Q8C2S0 AC165080.2-201ENSMUST00000217491 1530 ntBASIC23.16■■□□□ 1.3
Usp44Q8C2S0 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
Usp44Q8C2S0 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
Usp44Q8C2S0 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Usp44Q8C2S0 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Usp44Q8C2S0 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
Usp44Q8C2S0 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC23.15■■□□□ 1.3
Usp44Q8C2S0 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.29
Usp44Q8C2S0 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Usp44Q8C2S0 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
Usp44Q8C2S0 AC154266.1-201ENSMUST00000223190 503 ntBASIC23.14■■□□□ 1.29
Usp44Q8C2S0 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
Usp44Q8C2S0 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC23.13■■□□□ 1.29
Usp44Q8C2S0 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Usp44Q8C2S0 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Usp44Q8C2S0 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Usp44Q8C2S0 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
Usp44Q8C2S0 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
Usp44Q8C2S0 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Usp44Q8C2S0 Smad6-203ENSMUST00000179458 273 ntBASIC23.12■■□□□ 1.29
Usp44Q8C2S0 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Usp44Q8C2S0 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Usp44Q8C2S0 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Usp44Q8C2S0 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Usp44Q8C2S0 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Usp44Q8C2S0 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Usp44Q8C2S0 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Usp44Q8C2S0 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Usp44Q8C2S0 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
Usp44Q8C2S0 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Usp44Q8C2S0 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
Usp44Q8C2S0 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC23.1■■□□□ 1.29
Usp44Q8C2S0 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Usp44Q8C2S0 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC23.1■■□□□ 1.29
Usp44Q8C2S0 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
Usp44Q8C2S0 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
Usp44Q8C2S0 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Usp44Q8C2S0 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC23.09■■□□□ 1.29
Usp44Q8C2S0 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Usp44Q8C2S0 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Usp44Q8C2S0 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC23.08■■□□□ 1.29
Usp44Q8C2S0 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
Usp44Q8C2S0 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Usp44Q8C2S0 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Usp44Q8C2S0 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC23.08■■□□□ 1.28
Usp44Q8C2S0 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Usp44Q8C2S0 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Usp44Q8C2S0 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Usp44Q8C2S0 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Usp44Q8C2S0 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC23.07■■□□□ 1.28
Usp44Q8C2S0 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC23.07■■□□□ 1.28
Usp44Q8C2S0 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Usp44Q8C2S0 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
Usp44Q8C2S0 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Usp44Q8C2S0 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Usp44Q8C2S0 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
Usp44Q8C2S0 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Usp44Q8C2S0 Golph3-202ENSMUST00000226517 2359 ntBASIC23.06■■□□□ 1.28
Usp44Q8C2S0 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Usp44Q8C2S0 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Usp44Q8C2S0 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC23.06■■□□□ 1.28
Usp44Q8C2S0 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC23.06■■□□□ 1.28
Usp44Q8C2S0 Gm42911-201ENSMUST00000199360 1630 ntBASIC23.06■■□□□ 1.28
Usp44Q8C2S0 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC23.06■■□□□ 1.28
Usp44Q8C2S0 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Usp44Q8C2S0 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Usp44Q8C2S0 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
Usp44Q8C2S0 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
Usp44Q8C2S0 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Usp44Q8C2S0 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC23.05■■□□□ 1.28
Usp44Q8C2S0 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Usp44Q8C2S0 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Usp44Q8C2S0 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Usp44Q8C2S0 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Usp44Q8C2S0 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Usp44Q8C2S0 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Usp44Q8C2S0 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC23.04■■□□□ 1.28
Usp44Q8C2S0 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Usp44Q8C2S0 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Usp44Q8C2S0 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Usp44Q8C2S0 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC23.03■■□□□ 1.28
Usp44Q8C2S0 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC23.03■■□□□ 1.28
Usp44Q8C2S0 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Usp44Q8C2S0 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
Usp44Q8C2S0 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Usp44Q8C2S0 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Usp44Q8C2S0 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
Usp44Q8C2S0 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
Usp44Q8C2S0 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
Usp44Q8C2S0 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC23.02■■□□□ 1.28
Usp44Q8C2S0 Gm43017-201ENSMUST00000198296 752 ntBASIC23.02■■□□□ 1.28
Usp44Q8C2S0 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC23.02■■□□□ 1.28
Usp44Q8C2S0 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Usp44Q8C2S0 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Usp44Q8C2S0 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms