Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Tsen54Q8C2A2 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Tsen54Q8C2A2 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Tsen54Q8C2A2 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Tsen54Q8C2A2 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Tsen54Q8C2A2 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Tsen54Q8C2A2 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Tsen54Q8C2A2 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Tsen54Q8C2A2 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Tsen54Q8C2A2 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Tsen54Q8C2A2 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Tsen54Q8C2A2 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Tsen54Q8C2A2 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Tsen54Q8C2A2 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Tsen54Q8C2A2 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Tsen54Q8C2A2 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Tsen54Q8C2A2 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Tsen54Q8C2A2 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Tsen54Q8C2A2 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Tsen54Q8C2A2 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Tsen54Q8C2A2 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC16.34■□□□□ 0.21
Tsen54Q8C2A2 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Tsen54Q8C2A2 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Tsen54Q8C2A2 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Tsen54Q8C2A2 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Tsen54Q8C2A2 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Tsen54Q8C2A2 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Tsen54Q8C2A2 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Tsen54Q8C2A2 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
Tsen54Q8C2A2 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Tsen54Q8C2A2 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Tsen54Q8C2A2 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Tsen54Q8C2A2 Gm42900-201ENSMUST00000197184 2167 ntBASIC16.33■□□□□ 0.2
Tsen54Q8C2A2 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Tsen54Q8C2A2 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Tsen54Q8C2A2 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Tsen54Q8C2A2 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Tsen54Q8C2A2 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Tsen54Q8C2A2 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Tsen54Q8C2A2 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Tsen54Q8C2A2 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Tsen54Q8C2A2 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Tsen54Q8C2A2 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tsen54Q8C2A2 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tsen54Q8C2A2 Gm15546-201ENSMUST00000122095 826 ntBASIC16.32■□□□□ 0.2
Tsen54Q8C2A2 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC16.32■□□□□ 0.2
Tsen54Q8C2A2 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tsen54Q8C2A2 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tsen54Q8C2A2 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Tsen54Q8C2A2 Gm28536-201ENSMUST00000190971 1317 ntBASIC16.32■□□□□ 0.2
Tsen54Q8C2A2 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC16.32■□□□□ 0.2
Tsen54Q8C2A2 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tsen54Q8C2A2 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tsen54Q8C2A2 Gm38342-201ENSMUST00000195710 2980 ntBASIC16.32■□□□□ 0.2
Tsen54Q8C2A2 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tsen54Q8C2A2 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC16.32■□□□□ 0.2
Tsen54Q8C2A2 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tsen54Q8C2A2 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tsen54Q8C2A2 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tsen54Q8C2A2 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Tsen54Q8C2A2 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tsen54Q8C2A2 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tsen54Q8C2A2 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC16.31■□□□□ 0.2
Tsen54Q8C2A2 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tsen54Q8C2A2 Gm5522-201ENSMUST00000189483 1242 ntBASIC16.31■□□□□ 0.2
Tsen54Q8C2A2 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC16.31■□□□□ 0.2
Tsen54Q8C2A2 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC16.31■□□□□ 0.2
Tsen54Q8C2A2 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tsen54Q8C2A2 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Tsen54Q8C2A2 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tsen54Q8C2A2 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tsen54Q8C2A2 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tsen54Q8C2A2 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tsen54Q8C2A2 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tsen54Q8C2A2 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tsen54Q8C2A2 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC16.3■□□□□ 0.2
Tsen54Q8C2A2 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tsen54Q8C2A2 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Tsen54Q8C2A2 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tsen54Q8C2A2 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Tsen54Q8C2A2 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tsen54Q8C2A2 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tsen54Q8C2A2 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Tsen54Q8C2A2 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tsen54Q8C2A2 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Tsen54Q8C2A2 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tsen54Q8C2A2 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tsen54Q8C2A2 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tsen54Q8C2A2 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC16.29■□□□□ 0.2
Tsen54Q8C2A2 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tsen54Q8C2A2 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Tsen54Q8C2A2 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tsen54Q8C2A2 Gm16464-201ENSMUST00000117815 1095 ntBASIC16.29■□□□□ 0.2
Tsen54Q8C2A2 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Tsen54Q8C2A2 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Tsen54Q8C2A2 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tsen54Q8C2A2 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
Tsen54Q8C2A2 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tsen54Q8C2A2 Gm43231-201ENSMUST00000202960 2258 ntBASIC16.29■□□□□ 0.2
Tsen54Q8C2A2 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms