Protein–RNA interactions for Protein: Q8BUY9

Pggt1b, Geranylgeranyl transferase type-1 subunit beta, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pggt1bQ8BUY9 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Pggt1bQ8BUY9 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Pggt1bQ8BUY9 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pggt1bQ8BUY9 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pggt1bQ8BUY9 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pggt1bQ8BUY9 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.45■□□□□ 0.7
Pggt1bQ8BUY9 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC19.45■□□□□ 0.7
Pggt1bQ8BUY9 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Pggt1bQ8BUY9 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pggt1bQ8BUY9 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pggt1bQ8BUY9 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pggt1bQ8BUY9 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC19.45■□□□□ 0.7
Pggt1bQ8BUY9 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
Pggt1bQ8BUY9 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC19.45■□□□□ 0.7
Pggt1bQ8BUY9 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Pggt1bQ8BUY9 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pggt1bQ8BUY9 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC19.45■□□□□ 0.7
Pggt1bQ8BUY9 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pggt1bQ8BUY9 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC19.45■□□□□ 0.7
Pggt1bQ8BUY9 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pggt1bQ8BUY9 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pggt1bQ8BUY9 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Pggt1bQ8BUY9 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Pggt1bQ8BUY9 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Pggt1bQ8BUY9 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pggt1bQ8BUY9 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pggt1bQ8BUY9 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Pggt1bQ8BUY9 Gm8770-201ENSMUST00000121113 1109 ntBASIC19.44■□□□□ 0.7
Pggt1bQ8BUY9 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pggt1bQ8BUY9 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pggt1bQ8BUY9 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Pggt1bQ8BUY9 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pggt1bQ8BUY9 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pggt1bQ8BUY9 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pggt1bQ8BUY9 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pggt1bQ8BUY9 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC19.43■□□□□ 0.7
Pggt1bQ8BUY9 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pggt1bQ8BUY9 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pggt1bQ8BUY9 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC19.43■□□□□ 0.7
Pggt1bQ8BUY9 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC19.43■□□□□ 0.7
Pggt1bQ8BUY9 Gm27045-201ENSMUST00000182145 1402 ntBASIC19.42■□□□□ 0.7
Pggt1bQ8BUY9 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pggt1bQ8BUY9 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pggt1bQ8BUY9 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC19.42■□□□□ 0.7
Pggt1bQ8BUY9 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC19.42■□□□□ 0.7
Pggt1bQ8BUY9 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pggt1bQ8BUY9 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pggt1bQ8BUY9 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pggt1bQ8BUY9 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pggt1bQ8BUY9 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pggt1bQ8BUY9 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pggt1bQ8BUY9 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pggt1bQ8BUY9 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC19.41■□□□□ 0.7
Pggt1bQ8BUY9 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.41■□□□□ 0.7
Pggt1bQ8BUY9 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC19.41■□□□□ 0.7
Pggt1bQ8BUY9 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pggt1bQ8BUY9 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Pggt1bQ8BUY9 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pggt1bQ8BUY9 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pggt1bQ8BUY9 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Pggt1bQ8BUY9 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pggt1bQ8BUY9 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pggt1bQ8BUY9 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Pggt1bQ8BUY9 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pggt1bQ8BUY9 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pggt1bQ8BUY9 Golgb1-201ENSMUST00000023534 498 ntBASIC19.4■□□□□ 0.7
Pggt1bQ8BUY9 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pggt1bQ8BUY9 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pggt1bQ8BUY9 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Pggt1bQ8BUY9 Gm6085-201ENSMUST00000182774 1470 ntBASIC19.4■□□□□ 0.7
Pggt1bQ8BUY9 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC19.4■□□□□ 0.7
Pggt1bQ8BUY9 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Pggt1bQ8BUY9 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Pggt1bQ8BUY9 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Pggt1bQ8BUY9 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.39■□□□□ 0.69
Pggt1bQ8BUY9 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pggt1bQ8BUY9 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
Pggt1bQ8BUY9 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC19.39■□□□□ 0.69
Pggt1bQ8BUY9 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Pggt1bQ8BUY9 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Pggt1bQ8BUY9 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pggt1bQ8BUY9 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.39■□□□□ 0.69
Pggt1bQ8BUY9 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pggt1bQ8BUY9 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Pggt1bQ8BUY9 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pggt1bQ8BUY9 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pggt1bQ8BUY9 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pggt1bQ8BUY9 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pggt1bQ8BUY9 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Pggt1bQ8BUY9 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Pggt1bQ8BUY9 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
Pggt1bQ8BUY9 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC19.37■□□□□ 0.69
Pggt1bQ8BUY9 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pggt1bQ8BUY9 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Pggt1bQ8BUY9 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Pggt1bQ8BUY9 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pggt1bQ8BUY9 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Pggt1bQ8BUY9 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC19.36■□□□□ 0.69
Pggt1bQ8BUY9 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC19.36■□□□□ 0.69
Pggt1bQ8BUY9 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms