Protein–RNA interactions for Protein: Q8BUM9

Usp43, Ubiquitin carboxyl-terminal hydrolase 43, mousemouse

Predictions only

Length 1,132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp43Q8BUM9 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC19.94■□□□□ 0.78
Usp43Q8BUM9 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Usp43Q8BUM9 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Usp43Q8BUM9 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Usp43Q8BUM9 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Usp43Q8BUM9 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Usp43Q8BUM9 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC19.94■□□□□ 0.78
Usp43Q8BUM9 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Usp43Q8BUM9 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Usp43Q8BUM9 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Usp43Q8BUM9 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Usp43Q8BUM9 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC19.93■□□□□ 0.78
Usp43Q8BUM9 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Usp43Q8BUM9 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Usp43Q8BUM9 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Usp43Q8BUM9 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
Usp43Q8BUM9 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Usp43Q8BUM9 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Usp43Q8BUM9 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Usp43Q8BUM9 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Usp43Q8BUM9 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Usp43Q8BUM9 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Usp43Q8BUM9 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Usp43Q8BUM9 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Usp43Q8BUM9 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC19.92■□□□□ 0.78
Usp43Q8BUM9 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC19.92■□□□□ 0.78
Usp43Q8BUM9 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Usp43Q8BUM9 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC19.92■□□□□ 0.78
Usp43Q8BUM9 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Usp43Q8BUM9 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC19.91■□□□□ 0.78
Usp43Q8BUM9 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Usp43Q8BUM9 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Usp43Q8BUM9 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC19.91■□□□□ 0.78
Usp43Q8BUM9 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC19.91■□□□□ 0.78
Usp43Q8BUM9 Spcs1-204ENSMUST00000226782 949 ntBASIC19.91■□□□□ 0.78
Usp43Q8BUM9 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Usp43Q8BUM9 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Usp43Q8BUM9 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19.91■□□□□ 0.78
Usp43Q8BUM9 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Usp43Q8BUM9 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Usp43Q8BUM9 Golph3-202ENSMUST00000226517 2359 ntBASIC19.91■□□□□ 0.78
Usp43Q8BUM9 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Usp43Q8BUM9 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Usp43Q8BUM9 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Usp43Q8BUM9 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Usp43Q8BUM9 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Usp43Q8BUM9 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC19.9■□□□□ 0.78
Usp43Q8BUM9 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Usp43Q8BUM9 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC19.9■□□□□ 0.78
Usp43Q8BUM9 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Usp43Q8BUM9 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Usp43Q8BUM9 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Usp43Q8BUM9 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.78
Usp43Q8BUM9 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Usp43Q8BUM9 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Usp43Q8BUM9 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
Usp43Q8BUM9 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Usp43Q8BUM9 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Usp43Q8BUM9 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Usp43Q8BUM9 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Usp43Q8BUM9 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Usp43Q8BUM9 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Usp43Q8BUM9 Gm12251-201ENSMUST00000117893 792 ntBASIC19.88■□□□□ 0.77
Usp43Q8BUM9 Gm7160-202ENSMUST00000188519 1027 ntBASIC19.88■□□□□ 0.77
Usp43Q8BUM9 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Usp43Q8BUM9 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Usp43Q8BUM9 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Usp43Q8BUM9 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Usp43Q8BUM9 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Usp43Q8BUM9 Gm20100-201ENSMUST00000209418 2272 ntBASIC19.87■□□□□ 0.77
Usp43Q8BUM9 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC19.87■□□□□ 0.77
Usp43Q8BUM9 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Usp43Q8BUM9 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Usp43Q8BUM9 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Usp43Q8BUM9 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Usp43Q8BUM9 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Usp43Q8BUM9 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Usp43Q8BUM9 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Usp43Q8BUM9 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC19.87■□□□□ 0.77
Usp43Q8BUM9 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Usp43Q8BUM9 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Usp43Q8BUM9 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Usp43Q8BUM9 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Usp43Q8BUM9 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Usp43Q8BUM9 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Usp43Q8BUM9 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Usp43Q8BUM9 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Usp43Q8BUM9 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Usp43Q8BUM9 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Usp43Q8BUM9 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC19.86■□□□□ 0.77
Usp43Q8BUM9 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Usp43Q8BUM9 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Usp43Q8BUM9 Gm12821-201ENSMUST00000120022 600 ntBASIC19.86■□□□□ 0.77
Usp43Q8BUM9 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Usp43Q8BUM9 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Usp43Q8BUM9 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Usp43Q8BUM9 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Usp43Q8BUM9 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Usp43Q8BUM9 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Usp43Q8BUM9 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC19.85■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms