Protein–RNA interactions for Protein: Q8BT60

Cpne3, Copine-3, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne3Q8BT60 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Cpne3Q8BT60 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cpne3Q8BT60 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Cpne3Q8BT60 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Cpne3Q8BT60 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cpne3Q8BT60 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC18.91■□□□□ 0.62
Cpne3Q8BT60 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC18.91■□□□□ 0.62
Cpne3Q8BT60 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cpne3Q8BT60 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cpne3Q8BT60 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cpne3Q8BT60 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cpne3Q8BT60 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Cpne3Q8BT60 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Cpne3Q8BT60 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cpne3Q8BT60 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cpne3Q8BT60 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
Cpne3Q8BT60 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cpne3Q8BT60 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Cpne3Q8BT60 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Cpne3Q8BT60 Gm22238-201ENSMUST00000175222 88 ntBASIC18.9■□□□□ 0.62
Cpne3Q8BT60 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC18.9■□□□□ 0.62
Cpne3Q8BT60 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cpne3Q8BT60 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cpne3Q8BT60 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cpne3Q8BT60 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cpne3Q8BT60 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
Cpne3Q8BT60 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Cpne3Q8BT60 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
Cpne3Q8BT60 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
Cpne3Q8BT60 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cpne3Q8BT60 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Cpne3Q8BT60 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cpne3Q8BT60 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Cpne3Q8BT60 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
Cpne3Q8BT60 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC18.89■□□□□ 0.61
Cpne3Q8BT60 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cpne3Q8BT60 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Cpne3Q8BT60 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cpne3Q8BT60 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Cpne3Q8BT60 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cpne3Q8BT60 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cpne3Q8BT60 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC18.89■□□□□ 0.61
Cpne3Q8BT60 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Cpne3Q8BT60 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cpne3Q8BT60 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Cpne3Q8BT60 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Cpne3Q8BT60 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cpne3Q8BT60 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cpne3Q8BT60 Gm15043-201ENSMUST00000118843 1543 ntBASIC18.88■□□□□ 0.61
Cpne3Q8BT60 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cpne3Q8BT60 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cpne3Q8BT60 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Cpne3Q8BT60 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Cpne3Q8BT60 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cpne3Q8BT60 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cpne3Q8BT60 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cpne3Q8BT60 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Cpne3Q8BT60 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Cpne3Q8BT60 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cpne3Q8BT60 Gm14117-201ENSMUST00000122417 843 ntBASIC18.86■□□□□ 0.61
Cpne3Q8BT60 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cpne3Q8BT60 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cpne3Q8BT60 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC18.86■□□□□ 0.61
Cpne3Q8BT60 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cpne3Q8BT60 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC18.85■□□□□ 0.61
Cpne3Q8BT60 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cpne3Q8BT60 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
Cpne3Q8BT60 Gm6802-201ENSMUST00000167843 1983 ntBASIC18.85■□□□□ 0.61
Cpne3Q8BT60 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cpne3Q8BT60 Rps24-207ENSMUST00000224568 714 ntBASIC18.85■□□□□ 0.61
Cpne3Q8BT60 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Cpne3Q8BT60 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Cpne3Q8BT60 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cpne3Q8BT60 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC18.85■□□□□ 0.61
Cpne3Q8BT60 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
Cpne3Q8BT60 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cpne3Q8BT60 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Cpne3Q8BT60 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Cpne3Q8BT60 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC18.85■□□□□ 0.61
Cpne3Q8BT60 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cpne3Q8BT60 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Cpne3Q8BT60 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cpne3Q8BT60 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.84■□□□□ 0.61
Cpne3Q8BT60 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cpne3Q8BT60 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cpne3Q8BT60 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC18.84■□□□□ 0.61
Cpne3Q8BT60 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC18.84■□□□□ 0.61
Cpne3Q8BT60 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cpne3Q8BT60 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cpne3Q8BT60 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Cpne3Q8BT60 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.84■□□□□ 0.61
Cpne3Q8BT60 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Cpne3Q8BT60 Gm43545-201ENSMUST00000196765 2779 ntBASIC18.84■□□□□ 0.61
Cpne3Q8BT60 Cdkn3-203ENSMUST00000227149 1952 ntBASIC18.84■□□□□ 0.61
Cpne3Q8BT60 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cpne3Q8BT60 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Cpne3Q8BT60 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cpne3Q8BT60 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Cpne3Q8BT60 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Cpne3Q8BT60 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms