Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC19■□□□□ 0.63
Cpsf4Q8BQZ5 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC19■□□□□ 0.63
Cpsf4Q8BQZ5 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Cpsf4Q8BQZ5 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC18.99■□□□□ 0.63
Cpsf4Q8BQZ5 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cpsf4Q8BQZ5 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Cpsf4Q8BQZ5 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC18.99■□□□□ 0.63
Cpsf4Q8BQZ5 Gm15039-201ENSMUST00000118914 875 ntBASIC18.99■□□□□ 0.63
Cpsf4Q8BQZ5 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Cpsf4Q8BQZ5 Appbp2os-202ENSMUST00000206972 447 ntBASIC18.99■□□□□ 0.63
Cpsf4Q8BQZ5 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Cpsf4Q8BQZ5 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cpsf4Q8BQZ5 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cpsf4Q8BQZ5 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cpsf4Q8BQZ5 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cpsf4Q8BQZ5 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cpsf4Q8BQZ5 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Cpsf4Q8BQZ5 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Cpsf4Q8BQZ5 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cpsf4Q8BQZ5 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cpsf4Q8BQZ5 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cpsf4Q8BQZ5 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cpsf4Q8BQZ5 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cpsf4Q8BQZ5 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cpsf4Q8BQZ5 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cpsf4Q8BQZ5 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cpsf4Q8BQZ5 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cpsf4Q8BQZ5 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Cpsf4Q8BQZ5 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Cpsf4Q8BQZ5 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cpsf4Q8BQZ5 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Cpsf4Q8BQZ5 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Cpsf4Q8BQZ5 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cpsf4Q8BQZ5 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Cpsf4Q8BQZ5 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cpsf4Q8BQZ5 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Cpsf4Q8BQZ5 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cpsf4Q8BQZ5 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Cpsf4Q8BQZ5 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cpsf4Q8BQZ5 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cpsf4Q8BQZ5 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cpsf4Q8BQZ5 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cpsf4Q8BQZ5 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC18.96■□□□□ 0.63
Cpsf4Q8BQZ5 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Cpsf4Q8BQZ5 Gm45417-201ENSMUST00000209533 758 ntBASIC18.96■□□□□ 0.63
Cpsf4Q8BQZ5 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Cpsf4Q8BQZ5 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cpsf4Q8BQZ5 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Cpsf4Q8BQZ5 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cpsf4Q8BQZ5 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cpsf4Q8BQZ5 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cpsf4Q8BQZ5 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cpsf4Q8BQZ5 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cpsf4Q8BQZ5 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Cpsf4Q8BQZ5 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cpsf4Q8BQZ5 Gm12821-201ENSMUST00000120022 600 ntBASIC18.95■□□□□ 0.62
Cpsf4Q8BQZ5 Gm8770-201ENSMUST00000121113 1109 ntBASIC18.95■□□□□ 0.62
Cpsf4Q8BQZ5 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cpsf4Q8BQZ5 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC18.95■□□□□ 0.62
Cpsf4Q8BQZ5 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Cpsf4Q8BQZ5 Gm43530-201ENSMUST00000195920 274 ntBASIC18.95■□□□□ 0.62
Cpsf4Q8BQZ5 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cpsf4Q8BQZ5 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cpsf4Q8BQZ5 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cpsf4Q8BQZ5 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Cpsf4Q8BQZ5 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cpsf4Q8BQZ5 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Cpsf4Q8BQZ5 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Cpsf4Q8BQZ5 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cpsf4Q8BQZ5 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Cpsf4Q8BQZ5 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Cpsf4Q8BQZ5 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cpsf4Q8BQZ5 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cpsf4Q8BQZ5 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cpsf4Q8BQZ5 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Cpsf4Q8BQZ5 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Cpsf4Q8BQZ5 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Cpsf4Q8BQZ5 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cpsf4Q8BQZ5 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cpsf4Q8BQZ5 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Cpsf4Q8BQZ5 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cpsf4Q8BQZ5 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cpsf4Q8BQZ5 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cpsf4Q8BQZ5 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cpsf4Q8BQZ5 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cpsf4Q8BQZ5 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Cpsf4Q8BQZ5 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Cpsf4Q8BQZ5 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cpsf4Q8BQZ5 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cpsf4Q8BQZ5 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cpsf4Q8BQZ5 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cpsf4Q8BQZ5 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cpsf4Q8BQZ5 AC166356.1-201ENSMUST00000228236 1426 ntBASIC18.92■□□□□ 0.62
Cpsf4Q8BQZ5 Iqck-206ENSMUST00000208658 2891 ntBASIC18.92■□□□□ 0.62
Cpsf4Q8BQZ5 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Cpsf4Q8BQZ5 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cpsf4Q8BQZ5 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
Cpsf4Q8BQZ5 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cpsf4Q8BQZ5 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Cpsf4Q8BQZ5 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 83.3 ms