Protein–RNA interactions for Protein: Q8BQP8

Rab11fip4, Rab11 family-interacting protein 4, mousemouse

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip4Q8BQP8 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Rab11fip4Q8BQP8 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC21.73■■□□□ 1.07
Rab11fip4Q8BQP8 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Rab11fip4Q8BQP8 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Rab11fip4Q8BQP8 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Rab11fip4Q8BQP8 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Rab11fip4Q8BQP8 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Rab11fip4Q8BQP8 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
Rab11fip4Q8BQP8 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Rab11fip4Q8BQP8 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC21.72■■□□□ 1.07
Rab11fip4Q8BQP8 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC21.72■■□□□ 1.07
Rab11fip4Q8BQP8 Gm43530-201ENSMUST00000195920 274 ntBASIC21.72■■□□□ 1.07
Rab11fip4Q8BQP8 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
Rab11fip4Q8BQP8 Wdr70-203ENSMUST00000227371 1130 ntBASIC21.72■■□□□ 1.07
Rab11fip4Q8BQP8 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Rab11fip4Q8BQP8 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC21.72■■□□□ 1.07
Rab11fip4Q8BQP8 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Rab11fip4Q8BQP8 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC21.72■■□□□ 1.07
Rab11fip4Q8BQP8 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Rab11fip4Q8BQP8 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
Rab11fip4Q8BQP8 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Rab11fip4Q8BQP8 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC21.71■■□□□ 1.07
Rab11fip4Q8BQP8 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Rab11fip4Q8BQP8 Gm18284-201ENSMUST00000172604 624 ntBASIC21.71■■□□□ 1.07
Rab11fip4Q8BQP8 Gm8495-201ENSMUST00000188740 694 ntBASIC21.71■■□□□ 1.07
Rab11fip4Q8BQP8 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Rab11fip4Q8BQP8 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC21.71■■□□□ 1.07
Rab11fip4Q8BQP8 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Rab11fip4Q8BQP8 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.07
Rab11fip4Q8BQP8 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Rab11fip4Q8BQP8 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Rab11fip4Q8BQP8 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Rab11fip4Q8BQP8 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Rab11fip4Q8BQP8 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Rab11fip4Q8BQP8 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC21.7■■□□□ 1.06
Rab11fip4Q8BQP8 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC21.7■■□□□ 1.06
Rab11fip4Q8BQP8 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Rab11fip4Q8BQP8 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
Rab11fip4Q8BQP8 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Rab11fip4Q8BQP8 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC21.7■■□□□ 1.06
Rab11fip4Q8BQP8 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Rab11fip4Q8BQP8 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Rab11fip4Q8BQP8 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Rab11fip4Q8BQP8 AC166356.1-201ENSMUST00000228236 1426 ntBASIC21.7■■□□□ 1.06
Rab11fip4Q8BQP8 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Rab11fip4Q8BQP8 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
Rab11fip4Q8BQP8 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC21.69■■□□□ 1.06
Rab11fip4Q8BQP8 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC21.69■■□□□ 1.06
Rab11fip4Q8BQP8 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rab11fip4Q8BQP8 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rab11fip4Q8BQP8 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Rab11fip4Q8BQP8 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rab11fip4Q8BQP8 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rab11fip4Q8BQP8 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Rab11fip4Q8BQP8 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rab11fip4Q8BQP8 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rab11fip4Q8BQP8 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rab11fip4Q8BQP8 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rab11fip4Q8BQP8 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Rab11fip4Q8BQP8 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Rab11fip4Q8BQP8 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Rab11fip4Q8BQP8 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
Rab11fip4Q8BQP8 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Rab11fip4Q8BQP8 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Rab11fip4Q8BQP8 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rab11fip4Q8BQP8 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rab11fip4Q8BQP8 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rab11fip4Q8BQP8 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC21.67■■□□□ 1.06
Rab11fip4Q8BQP8 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC21.67■■□□□ 1.06
Rab11fip4Q8BQP8 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rab11fip4Q8BQP8 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Rab11fip4Q8BQP8 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rab11fip4Q8BQP8 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Rab11fip4Q8BQP8 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Rab11fip4Q8BQP8 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rab11fip4Q8BQP8 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rab11fip4Q8BQP8 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC21.66■■□□□ 1.06
Rab11fip4Q8BQP8 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Rab11fip4Q8BQP8 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Rab11fip4Q8BQP8 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rab11fip4Q8BQP8 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rab11fip4Q8BQP8 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rab11fip4Q8BQP8 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rab11fip4Q8BQP8 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rab11fip4Q8BQP8 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Rab11fip4Q8BQP8 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rab11fip4Q8BQP8 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rab11fip4Q8BQP8 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rab11fip4Q8BQP8 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Rab11fip4Q8BQP8 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rab11fip4Q8BQP8 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rab11fip4Q8BQP8 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Rab11fip4Q8BQP8 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rab11fip4Q8BQP8 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC21.65■■□□□ 1.06
Rab11fip4Q8BQP8 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Rab11fip4Q8BQP8 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC21.65■■□□□ 1.06
Rab11fip4Q8BQP8 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rab11fip4Q8BQP8 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC21.65■■□□□ 1.06
Rab11fip4Q8BQP8 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Rab11fip4Q8BQP8 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms