Protein–RNA interactions for Protein: Q8BLF2

Cdkl3, Cyclin-dependent kinase-like 3, mousemouse

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl3Q8BLF2 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cdkl3Q8BLF2 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cdkl3Q8BLF2 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cdkl3Q8BLF2 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cdkl3Q8BLF2 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Cdkl3Q8BLF2 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cdkl3Q8BLF2 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cdkl3Q8BLF2 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cdkl3Q8BLF2 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Cdkl3Q8BLF2 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Cdkl3Q8BLF2 Scarna2-201ENSMUST00000157560 414 ntBASIC16.92■□□□□ 0.3
Cdkl3Q8BLF2 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cdkl3Q8BLF2 Gm9806-201ENSMUST00000051080 552 ntBASIC16.92■□□□□ 0.3
Cdkl3Q8BLF2 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Cdkl3Q8BLF2 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Cdkl3Q8BLF2 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Cdkl3Q8BLF2 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cdkl3Q8BLF2 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC16.92■□□□□ 0.3
Cdkl3Q8BLF2 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
Cdkl3Q8BLF2 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cdkl3Q8BLF2 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC16.91■□□□□ 0.3
Cdkl3Q8BLF2 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Cdkl3Q8BLF2 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cdkl3Q8BLF2 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cdkl3Q8BLF2 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cdkl3Q8BLF2 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cdkl3Q8BLF2 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cdkl3Q8BLF2 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cdkl3Q8BLF2 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cdkl3Q8BLF2 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cdkl3Q8BLF2 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC16.91■□□□□ 0.3
Cdkl3Q8BLF2 Gm43909-201ENSMUST00000203443 1876 ntBASIC16.9■□□□□ 0.3
Cdkl3Q8BLF2 Gm35558-201ENSMUST00000222675 2219 ntBASIC16.9■□□□□ 0.3
Cdkl3Q8BLF2 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cdkl3Q8BLF2 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cdkl3Q8BLF2 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cdkl3Q8BLF2 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Cdkl3Q8BLF2 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Cdkl3Q8BLF2 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cdkl3Q8BLF2 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cdkl3Q8BLF2 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cdkl3Q8BLF2 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Cdkl3Q8BLF2 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Cdkl3Q8BLF2 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
Cdkl3Q8BLF2 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cdkl3Q8BLF2 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cdkl3Q8BLF2 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cdkl3Q8BLF2 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cdkl3Q8BLF2 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
Cdkl3Q8BLF2 Gm16437-201ENSMUST00000025669 507 ntBASIC16.89■□□□□ 0.29
Cdkl3Q8BLF2 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cdkl3Q8BLF2 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cdkl3Q8BLF2 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cdkl3Q8BLF2 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Cdkl3Q8BLF2 Gm42900-201ENSMUST00000197184 2167 ntBASIC16.89■□□□□ 0.29
Cdkl3Q8BLF2 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cdkl3Q8BLF2 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cdkl3Q8BLF2 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cdkl3Q8BLF2 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cdkl3Q8BLF2 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Cdkl3Q8BLF2 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Cdkl3Q8BLF2 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cdkl3Q8BLF2 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cdkl3Q8BLF2 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cdkl3Q8BLF2 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC16.88■□□□□ 0.29
Cdkl3Q8BLF2 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC16.88■□□□□ 0.29
Cdkl3Q8BLF2 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cdkl3Q8BLF2 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC16.88■□□□□ 0.29
Cdkl3Q8BLF2 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cdkl3Q8BLF2 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cdkl3Q8BLF2 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
Cdkl3Q8BLF2 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cdkl3Q8BLF2 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cdkl3Q8BLF2 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cdkl3Q8BLF2 Gm11687-201ENSMUST00000118911 886 ntBASIC16.87■□□□□ 0.29
Cdkl3Q8BLF2 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Cdkl3Q8BLF2 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cdkl3Q8BLF2 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
Cdkl3Q8BLF2 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Cdkl3Q8BLF2 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Cdkl3Q8BLF2 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cdkl3Q8BLF2 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cdkl3Q8BLF2 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cdkl3Q8BLF2 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Cdkl3Q8BLF2 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cdkl3Q8BLF2 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cdkl3Q8BLF2 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC16.86■□□□□ 0.29
Cdkl3Q8BLF2 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cdkl3Q8BLF2 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cdkl3Q8BLF2 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Cdkl3Q8BLF2 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Cdkl3Q8BLF2 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Cdkl3Q8BLF2 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cdkl3Q8BLF2 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Cdkl3Q8BLF2 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Cdkl3Q8BLF2 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cdkl3Q8BLF2 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cdkl3Q8BLF2 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cdkl3Q8BLF2 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Cdkl3Q8BLF2 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms