Protein–RNA interactions for Protein: Q8BJL0

Smarcal1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, mousemouse

Predictions only

Length 910 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcal1Q8BJL0 Gm13146-201ENSMUST00000118508 780 ntBASIC20.96■□□□□ 0.95
Smarcal1Q8BJL0 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC20.96■□□□□ 0.95
Smarcal1Q8BJL0 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC20.96■□□□□ 0.95
Smarcal1Q8BJL0 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Smarcal1Q8BJL0 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Smarcal1Q8BJL0 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Smarcal1Q8BJL0 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Smarcal1Q8BJL0 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC20.96■□□□□ 0.95
Smarcal1Q8BJL0 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Smarcal1Q8BJL0 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC20.95■□□□□ 0.94
Smarcal1Q8BJL0 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC20.95■□□□□ 0.94
Smarcal1Q8BJL0 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Smarcal1Q8BJL0 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Smarcal1Q8BJL0 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Smarcal1Q8BJL0 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Smarcal1Q8BJL0 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Smarcal1Q8BJL0 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Smarcal1Q8BJL0 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.95■□□□□ 0.94
Smarcal1Q8BJL0 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Smarcal1Q8BJL0 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Smarcal1Q8BJL0 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Smarcal1Q8BJL0 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Smarcal1Q8BJL0 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Smarcal1Q8BJL0 Mir5133-201ENSMUST00000174955 77 ntBASIC20.94■□□□□ 0.94
Smarcal1Q8BJL0 Gm42555-201ENSMUST00000199304 1039 ntBASIC20.94■□□□□ 0.94
Smarcal1Q8BJL0 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Smarcal1Q8BJL0 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Smarcal1Q8BJL0 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Smarcal1Q8BJL0 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Smarcal1Q8BJL0 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Smarcal1Q8BJL0 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Smarcal1Q8BJL0 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Smarcal1Q8BJL0 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Smarcal1Q8BJL0 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC20.93■□□□□ 0.94
Smarcal1Q8BJL0 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Smarcal1Q8BJL0 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC20.93■□□□□ 0.94
Smarcal1Q8BJL0 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Smarcal1Q8BJL0 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC20.92■□□□□ 0.94
Smarcal1Q8BJL0 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Smarcal1Q8BJL0 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC20.92■□□□□ 0.94
Smarcal1Q8BJL0 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Smarcal1Q8BJL0 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Smarcal1Q8BJL0 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Smarcal1Q8BJL0 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Smarcal1Q8BJL0 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Smarcal1Q8BJL0 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Smarcal1Q8BJL0 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Smarcal1Q8BJL0 Gm12441-201ENSMUST00000121806 588 ntBASIC20.91■□□□□ 0.94
Smarcal1Q8BJL0 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Smarcal1Q8BJL0 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Smarcal1Q8BJL0 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Smarcal1Q8BJL0 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Smarcal1Q8BJL0 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Smarcal1Q8BJL0 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Smarcal1Q8BJL0 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC20.91■□□□□ 0.94
Smarcal1Q8BJL0 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Smarcal1Q8BJL0 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Smarcal1Q8BJL0 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Smarcal1Q8BJL0 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC20.9■□□□□ 0.94
Smarcal1Q8BJL0 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Smarcal1Q8BJL0 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC20.9■□□□□ 0.94
Smarcal1Q8BJL0 CT030146.1-201ENSMUST00000220919 217 ntBASIC20.9■□□□□ 0.94
Smarcal1Q8BJL0 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Smarcal1Q8BJL0 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Smarcal1Q8BJL0 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Smarcal1Q8BJL0 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.9■□□□□ 0.94
Smarcal1Q8BJL0 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Smarcal1Q8BJL0 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Smarcal1Q8BJL0 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Smarcal1Q8BJL0 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Smarcal1Q8BJL0 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Smarcal1Q8BJL0 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Smarcal1Q8BJL0 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Smarcal1Q8BJL0 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Smarcal1Q8BJL0 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Smarcal1Q8BJL0 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Smarcal1Q8BJL0 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Smarcal1Q8BJL0 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Smarcal1Q8BJL0 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Smarcal1Q8BJL0 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Smarcal1Q8BJL0 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Smarcal1Q8BJL0 Notumos-201ENSMUST00000151998 2659 ntBASIC20.88■□□□□ 0.93
Smarcal1Q8BJL0 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
Smarcal1Q8BJL0 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
Smarcal1Q8BJL0 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Smarcal1Q8BJL0 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Smarcal1Q8BJL0 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Smarcal1Q8BJL0 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Smarcal1Q8BJL0 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Smarcal1Q8BJL0 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Smarcal1Q8BJL0 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC20.87■□□□□ 0.93
Smarcal1Q8BJL0 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Smarcal1Q8BJL0 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Smarcal1Q8BJL0 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Smarcal1Q8BJL0 Gm7290-201ENSMUST00000104990 617 ntBASIC20.87■□□□□ 0.93
Smarcal1Q8BJL0 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Smarcal1Q8BJL0 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Smarcal1Q8BJL0 Gm12918-201ENSMUST00000120234 636 ntBASIC20.87■□□□□ 0.93
Smarcal1Q8BJL0 Gm15710-201ENSMUST00000121821 636 ntBASIC20.87■□□□□ 0.93
Smarcal1Q8BJL0 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms