Protein–RNA interactions for Protein: Q8BJ37

Tdp1, Tyrosyl-DNA phosphodiesterase 1, mousemouse

Predictions only

Length 609 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tdp1Q8BJ37 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Tdp1Q8BJ37 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Tdp1Q8BJ37 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Tdp1Q8BJ37 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Tdp1Q8BJ37 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Tdp1Q8BJ37 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC21.79■■□□□ 1.08
Tdp1Q8BJ37 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Tdp1Q8BJ37 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Tdp1Q8BJ37 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Tdp1Q8BJ37 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
Tdp1Q8BJ37 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Tdp1Q8BJ37 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Tdp1Q8BJ37 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Tdp1Q8BJ37 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC21.78■■□□□ 1.08
Tdp1Q8BJ37 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC21.78■■□□□ 1.08
Tdp1Q8BJ37 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
Tdp1Q8BJ37 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
Tdp1Q8BJ37 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Tdp1Q8BJ37 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Tdp1Q8BJ37 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
Tdp1Q8BJ37 Gm42555-201ENSMUST00000199304 1039 ntBASIC21.77■■□□□ 1.08
Tdp1Q8BJ37 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Tdp1Q8BJ37 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Tdp1Q8BJ37 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Tdp1Q8BJ37 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.07
Tdp1Q8BJ37 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC21.77■■□□□ 1.07
Tdp1Q8BJ37 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Tdp1Q8BJ37 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Tdp1Q8BJ37 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC21.77■■□□□ 1.07
Tdp1Q8BJ37 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Tdp1Q8BJ37 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Tdp1Q8BJ37 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
Tdp1Q8BJ37 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
Tdp1Q8BJ37 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC21.76■■□□□ 1.07
Tdp1Q8BJ37 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
Tdp1Q8BJ37 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC21.76■■□□□ 1.07
Tdp1Q8BJ37 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Tdp1Q8BJ37 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Tdp1Q8BJ37 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Tdp1Q8BJ37 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Tdp1Q8BJ37 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC21.75■■□□□ 1.07
Tdp1Q8BJ37 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Tdp1Q8BJ37 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
Tdp1Q8BJ37 Gm13146-201ENSMUST00000118508 780 ntBASIC21.75■■□□□ 1.07
Tdp1Q8BJ37 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Tdp1Q8BJ37 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC21.75■■□□□ 1.07
Tdp1Q8BJ37 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
Tdp1Q8BJ37 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC21.75■■□□□ 1.07
Tdp1Q8BJ37 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
Tdp1Q8BJ37 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Tdp1Q8BJ37 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
Tdp1Q8BJ37 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Tdp1Q8BJ37 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Tdp1Q8BJ37 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Tdp1Q8BJ37 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Tdp1Q8BJ37 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Tdp1Q8BJ37 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Tdp1Q8BJ37 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Tdp1Q8BJ37 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC21.74■■□□□ 1.07
Tdp1Q8BJ37 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
Tdp1Q8BJ37 Mir5133-201ENSMUST00000174955 77 ntBASIC21.74■■□□□ 1.07
Tdp1Q8BJ37 Gm38205-201ENSMUST00000192243 258 ntBASIC21.74■■□□□ 1.07
Tdp1Q8BJ37 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Tdp1Q8BJ37 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Tdp1Q8BJ37 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Tdp1Q8BJ37 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
Tdp1Q8BJ37 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
Tdp1Q8BJ37 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Tdp1Q8BJ37 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC21.74■■□□□ 1.07
Tdp1Q8BJ37 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Tdp1Q8BJ37 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Tdp1Q8BJ37 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
Tdp1Q8BJ37 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC21.73■■□□□ 1.07
Tdp1Q8BJ37 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Tdp1Q8BJ37 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Tdp1Q8BJ37 Gm17641-201ENSMUST00000166328 2350 ntBASIC21.73■■□□□ 1.07
Tdp1Q8BJ37 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Tdp1Q8BJ37 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Tdp1Q8BJ37 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Tdp1Q8BJ37 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
Tdp1Q8BJ37 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Tdp1Q8BJ37 CT010467.1-202ENSMUST00000205406 714 ntBASIC21.72■■□□□ 1.07
Tdp1Q8BJ37 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Tdp1Q8BJ37 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Tdp1Q8BJ37 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
Tdp1Q8BJ37 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Tdp1Q8BJ37 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Tdp1Q8BJ37 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC21.72■■□□□ 1.07
Tdp1Q8BJ37 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Tdp1Q8BJ37 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Tdp1Q8BJ37 Cdkn3-203ENSMUST00000227149 1952 ntBASIC21.71■■□□□ 1.07
Tdp1Q8BJ37 Gm12441-201ENSMUST00000121806 588 ntBASIC21.71■■□□□ 1.07
Tdp1Q8BJ37 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC21.71■■□□□ 1.07
Tdp1Q8BJ37 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Tdp1Q8BJ37 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC21.71■■□□□ 1.07
Tdp1Q8BJ37 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Tdp1Q8BJ37 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
Tdp1Q8BJ37 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
Tdp1Q8BJ37 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Tdp1Q8BJ37 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms