Protein–RNA interactions for Protein: Q8BHB0

Nod1, Nucleotide-binding oligomerization domain-containing protein 1, mousemouse

Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nod1Q8BHB0 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nod1Q8BHB0 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nod1Q8BHB0 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Nod1Q8BHB0 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nod1Q8BHB0 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC20.69■□□□□ 0.9
Nod1Q8BHB0 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Nod1Q8BHB0 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC20.69■□□□□ 0.9
Nod1Q8BHB0 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Nod1Q8BHB0 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nod1Q8BHB0 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nod1Q8BHB0 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Nod1Q8BHB0 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nod1Q8BHB0 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nod1Q8BHB0 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nod1Q8BHB0 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC20.68■□□□□ 0.9
Nod1Q8BHB0 Ap3s1-204ENSMUST00000225520 957 ntBASIC20.68■□□□□ 0.9
Nod1Q8BHB0 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nod1Q8BHB0 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Nod1Q8BHB0 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Nod1Q8BHB0 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nod1Q8BHB0 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nod1Q8BHB0 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nod1Q8BHB0 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nod1Q8BHB0 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nod1Q8BHB0 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC20.67■□□□□ 0.9
Nod1Q8BHB0 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nod1Q8BHB0 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nod1Q8BHB0 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nod1Q8BHB0 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nod1Q8BHB0 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC20.66■□□□□ 0.9
Nod1Q8BHB0 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Nod1Q8BHB0 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Nod1Q8BHB0 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Nod1Q8BHB0 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
Nod1Q8BHB0 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Nod1Q8BHB0 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Nod1Q8BHB0 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nod1Q8BHB0 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Nod1Q8BHB0 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nod1Q8BHB0 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Nod1Q8BHB0 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nod1Q8BHB0 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Nod1Q8BHB0 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Nod1Q8BHB0 Gm12669-201ENSMUST00000122162 1009 ntBASIC20.64■□□□□ 0.89
Nod1Q8BHB0 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Nod1Q8BHB0 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Nod1Q8BHB0 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC20.64■□□□□ 0.89
Nod1Q8BHB0 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC20.64■□□□□ 0.89
Nod1Q8BHB0 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
Nod1Q8BHB0 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Nod1Q8BHB0 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Nod1Q8BHB0 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nod1Q8BHB0 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Nod1Q8BHB0 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Nod1Q8BHB0 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Nod1Q8BHB0 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nod1Q8BHB0 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Nod1Q8BHB0 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC20.63■□□□□ 0.89
Nod1Q8BHB0 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC20.63■□□□□ 0.89
Nod1Q8BHB0 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC20.63■□□□□ 0.89
Nod1Q8BHB0 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Nod1Q8BHB0 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Nod1Q8BHB0 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nod1Q8BHB0 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nod1Q8BHB0 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nod1Q8BHB0 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Nod1Q8BHB0 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nod1Q8BHB0 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nod1Q8BHB0 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Nod1Q8BHB0 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nod1Q8BHB0 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nod1Q8BHB0 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC20.62■□□□□ 0.89
Nod1Q8BHB0 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Nod1Q8BHB0 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Nod1Q8BHB0 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nod1Q8BHB0 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Nod1Q8BHB0 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nod1Q8BHB0 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Nod1Q8BHB0 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC20.61■□□□□ 0.89
Nod1Q8BHB0 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Nod1Q8BHB0 Gm32051-202ENSMUST00000197905 2385 ntBASIC20.61■□□□□ 0.89
Nod1Q8BHB0 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nod1Q8BHB0 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nod1Q8BHB0 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nod1Q8BHB0 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nod1Q8BHB0 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nod1Q8BHB0 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Nod1Q8BHB0 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC20.6■□□□□ 0.89
Nod1Q8BHB0 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Nod1Q8BHB0 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Nod1Q8BHB0 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Nod1Q8BHB0 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Nod1Q8BHB0 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nod1Q8BHB0 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nod1Q8BHB0 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nod1Q8BHB0 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nod1Q8BHB0 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Nod1Q8BHB0 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nod1Q8BHB0 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Nod1Q8BHB0 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC20.58■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms