Protein–RNA interactions for Protein: Q80VM9

Otop1, Otopetrin-1, mousemouse

Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otop1Q80VM9 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Otop1Q80VM9 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
Otop1Q80VM9 Gm7514-201ENSMUST00000209475 934 ntBASIC18.86■□□□□ 0.61
Otop1Q80VM9 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Otop1Q80VM9 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Otop1Q80VM9 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Otop1Q80VM9 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Otop1Q80VM9 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Otop1Q80VM9 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Otop1Q80VM9 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Otop1Q80VM9 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Otop1Q80VM9 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Otop1Q80VM9 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Otop1Q80VM9 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC18.85■□□□□ 0.61
Otop1Q80VM9 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Otop1Q80VM9 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Otop1Q80VM9 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Otop1Q80VM9 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Otop1Q80VM9 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Otop1Q80VM9 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Otop1Q80VM9 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Otop1Q80VM9 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Otop1Q80VM9 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Otop1Q80VM9 Gm10653-202ENSMUST00000139570 835 ntBASIC18.84■□□□□ 0.61
Otop1Q80VM9 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Otop1Q80VM9 Ap3s1-204ENSMUST00000225520 957 ntBASIC18.84■□□□□ 0.61
Otop1Q80VM9 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Otop1Q80VM9 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Otop1Q80VM9 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Otop1Q80VM9 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Otop1Q80VM9 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Otop1Q80VM9 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Otop1Q80VM9 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Otop1Q80VM9 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Otop1Q80VM9 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC18.83■□□□□ 0.6
Otop1Q80VM9 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Otop1Q80VM9 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Otop1Q80VM9 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Otop1Q80VM9 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC18.82■□□□□ 0.6
Otop1Q80VM9 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Otop1Q80VM9 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Otop1Q80VM9 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC18.82■□□□□ 0.6
Otop1Q80VM9 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Otop1Q80VM9 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC18.82■□□□□ 0.6
Otop1Q80VM9 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Otop1Q80VM9 Mir5133-201ENSMUST00000174955 77 ntBASIC18.81■□□□□ 0.6
Otop1Q80VM9 Gm27801-201ENSMUST00000184174 223 ntBASIC18.81■□□□□ 0.6
Otop1Q80VM9 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC18.81■□□□□ 0.6
Otop1Q80VM9 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Otop1Q80VM9 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Otop1Q80VM9 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Otop1Q80VM9 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Otop1Q80VM9 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Otop1Q80VM9 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Otop1Q80VM9 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Otop1Q80VM9 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Otop1Q80VM9 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Otop1Q80VM9 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC18.8■□□□□ 0.6
Otop1Q80VM9 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Otop1Q80VM9 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Otop1Q80VM9 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Otop1Q80VM9 Mir6236-201ENSMUST00000184437 123 ntBASIC18.8■□□□□ 0.6
Otop1Q80VM9 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Otop1Q80VM9 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Otop1Q80VM9 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Otop1Q80VM9 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Otop1Q80VM9 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Otop1Q80VM9 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Otop1Q80VM9 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Otop1Q80VM9 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Otop1Q80VM9 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Otop1Q80VM9 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Otop1Q80VM9 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Otop1Q80VM9 Hsf1-207ENSMUST00000228371 2102 ntBASIC18.79■□□□□ 0.6
Otop1Q80VM9 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Otop1Q80VM9 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Otop1Q80VM9 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC18.79■□□□□ 0.6
Otop1Q80VM9 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC18.79■□□□□ 0.6
Otop1Q80VM9 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC18.79■□□□□ 0.6
Otop1Q80VM9 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Otop1Q80VM9 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Otop1Q80VM9 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Otop1Q80VM9 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
Otop1Q80VM9 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Otop1Q80VM9 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Otop1Q80VM9 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Otop1Q80VM9 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Otop1Q80VM9 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC18.78■□□□□ 0.6
Otop1Q80VM9 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Otop1Q80VM9 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Otop1Q80VM9 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Otop1Q80VM9 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Otop1Q80VM9 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
Otop1Q80VM9 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Otop1Q80VM9 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Otop1Q80VM9 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Otop1Q80VM9 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Otop1Q80VM9 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Otop1Q80VM9 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Otop1Q80VM9 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms