Protein–RNA interactions for Protein: Q80VA5

Sh3tc2, SH3 domain and tetratricopeptide repeat-containing protein 2, mousemouse

Predictions only

Length 1,289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3tc2Q80VA5 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Sh3tc2Q80VA5 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Sh3tc2Q80VA5 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Sh3tc2Q80VA5 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
Sh3tc2Q80VA5 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
Sh3tc2Q80VA5 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Sh3tc2Q80VA5 AC137127.1-201ENSMUST00000213466 1078 ntBASIC21.39■■□□□ 1.01
Sh3tc2Q80VA5 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
Sh3tc2Q80VA5 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Sh3tc2Q80VA5 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC21.39■■□□□ 1.01
Sh3tc2Q80VA5 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Sh3tc2Q80VA5 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Sh3tc2Q80VA5 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Sh3tc2Q80VA5 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Sh3tc2Q80VA5 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Sh3tc2Q80VA5 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC21.38■■□□□ 1.01
Sh3tc2Q80VA5 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Sh3tc2Q80VA5 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
Sh3tc2Q80VA5 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Sh3tc2Q80VA5 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
Sh3tc2Q80VA5 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Sh3tc2Q80VA5 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Sh3tc2Q80VA5 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
Sh3tc2Q80VA5 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Sh3tc2Q80VA5 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Sh3tc2Q80VA5 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Sh3tc2Q80VA5 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Sh3tc2Q80VA5 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Sh3tc2Q80VA5 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Sh3tc2Q80VA5 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Sh3tc2Q80VA5 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
Sh3tc2Q80VA5 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Sh3tc2Q80VA5 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC21.37■■□□□ 1.01
Sh3tc2Q80VA5 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC21.37■■□□□ 1.01
Sh3tc2Q80VA5 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC21.37■■□□□ 1.01
Sh3tc2Q80VA5 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Sh3tc2Q80VA5 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Sh3tc2Q80VA5 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Sh3tc2Q80VA5 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Sh3tc2Q80VA5 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC21.36■■□□□ 1.01
Sh3tc2Q80VA5 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Sh3tc2Q80VA5 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Sh3tc2Q80VA5 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Sh3tc2Q80VA5 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Sh3tc2Q80VA5 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
Sh3tc2Q80VA5 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Sh3tc2Q80VA5 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Sh3tc2Q80VA5 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Sh3tc2Q80VA5 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Sh3tc2Q80VA5 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Sh3tc2Q80VA5 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC21.35■■□□□ 1.01
Sh3tc2Q80VA5 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC21.35■■□□□ 1.01
Sh3tc2Q80VA5 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC21.35■■□□□ 1.01
Sh3tc2Q80VA5 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
Sh3tc2Q80VA5 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
Sh3tc2Q80VA5 Reep4-203ENSMUST00000226563 1444 ntBASIC21.35■■□□□ 1.01
Sh3tc2Q80VA5 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
Sh3tc2Q80VA5 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Sh3tc2Q80VA5 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Sh3tc2Q80VA5 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC21.34■■□□□ 1.01
Sh3tc2Q80VA5 Gm13234-201ENSMUST00000120010 747 ntBASIC21.34■■□□□ 1.01
Sh3tc2Q80VA5 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC21.34■■□□□ 1.01
Sh3tc2Q80VA5 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC21.34■■□□□ 1.01
Sh3tc2Q80VA5 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
Sh3tc2Q80VA5 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Sh3tc2Q80VA5 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC21.34■■□□□ 1.01
Sh3tc2Q80VA5 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Sh3tc2Q80VA5 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
Sh3tc2Q80VA5 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Sh3tc2Q80VA5 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Sh3tc2Q80VA5 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Sh3tc2Q80VA5 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC21.33■■□□□ 1.01
Sh3tc2Q80VA5 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
Sh3tc2Q80VA5 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Sh3tc2Q80VA5 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
Sh3tc2Q80VA5 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC21.33■■□□□ 1
Sh3tc2Q80VA5 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC21.33■■□□□ 1
Sh3tc2Q80VA5 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC21.33■■□□□ 1
Sh3tc2Q80VA5 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Sh3tc2Q80VA5 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC21.32■■□□□ 1
Sh3tc2Q80VA5 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Sh3tc2Q80VA5 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Sh3tc2Q80VA5 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Sh3tc2Q80VA5 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC21.32■■□□□ 1
Sh3tc2Q80VA5 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Sh3tc2Q80VA5 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Sh3tc2Q80VA5 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC21.32■■□□□ 1
Sh3tc2Q80VA5 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
Sh3tc2Q80VA5 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Sh3tc2Q80VA5 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Sh3tc2Q80VA5 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Sh3tc2Q80VA5 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Sh3tc2Q80VA5 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Sh3tc2Q80VA5 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Sh3tc2Q80VA5 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC21.31■■□□□ 1
Sh3tc2Q80VA5 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC21.31■■□□□ 1
Sh3tc2Q80VA5 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Sh3tc2Q80VA5 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Sh3tc2Q80VA5 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Sh3tc2Q80VA5 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms