Protein–RNA interactions for Protein: Q80V85

Trim62, E3 ubiquitin-protein ligase TRIM62, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim62Q80V85 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Trim62Q80V85 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trim62Q80V85 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Trim62Q80V85 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trim62Q80V85 AA386476-201ENSMUST00000098781 1665 ntBASIC20.36■□□□□ 0.85
Trim62Q80V85 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Trim62Q80V85 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Trim62Q80V85 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC20.36■□□□□ 0.85
Trim62Q80V85 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC20.36■□□□□ 0.85
Trim62Q80V85 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.36■□□□□ 0.85
Trim62Q80V85 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trim62Q80V85 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC20.36■□□□□ 0.85
Trim62Q80V85 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trim62Q80V85 Gm15039-201ENSMUST00000118914 875 ntBASIC20.35■□□□□ 0.85
Trim62Q80V85 Cdc34b-202ENSMUST00000188741 1252 ntBASIC20.35■□□□□ 0.85
Trim62Q80V85 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trim62Q80V85 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Trim62Q80V85 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trim62Q80V85 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trim62Q80V85 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trim62Q80V85 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trim62Q80V85 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC20.35■□□□□ 0.85
Trim62Q80V85 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Trim62Q80V85 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Trim62Q80V85 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Trim62Q80V85 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trim62Q80V85 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trim62Q80V85 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trim62Q80V85 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Trim62Q80V85 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Trim62Q80V85 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Trim62Q80V85 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC20.33■□□□□ 0.85
Trim62Q80V85 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Trim62Q80V85 Gm2011-201ENSMUST00000203124 1263 ntBASIC20.33■□□□□ 0.85
Trim62Q80V85 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Trim62Q80V85 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Trim62Q80V85 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Trim62Q80V85 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Trim62Q80V85 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Trim62Q80V85 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trim62Q80V85 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.32■□□□□ 0.84
Trim62Q80V85 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trim62Q80V85 Gm43060-201ENSMUST00000200621 289 ntBASIC20.32■□□□□ 0.84
Trim62Q80V85 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trim62Q80V85 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Trim62Q80V85 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trim62Q80V85 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trim62Q80V85 Gm6802-201ENSMUST00000167843 1983 ntBASIC20.32■□□□□ 0.84
Trim62Q80V85 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trim62Q80V85 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trim62Q80V85 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trim62Q80V85 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Trim62Q80V85 AC154266.1-201ENSMUST00000223190 503 ntBASIC20.31■□□□□ 0.84
Trim62Q80V85 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trim62Q80V85 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trim62Q80V85 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trim62Q80V85 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Trim62Q80V85 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trim62Q80V85 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trim62Q80V85 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trim62Q80V85 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Trim62Q80V85 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trim62Q80V85 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC20.3■□□□□ 0.84
Trim62Q80V85 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trim62Q80V85 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
Trim62Q80V85 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trim62Q80V85 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Trim62Q80V85 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Trim62Q80V85 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Trim62Q80V85 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trim62Q80V85 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trim62Q80V85 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trim62Q80V85 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trim62Q80V85 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Trim62Q80V85 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
Trim62Q80V85 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC20.29■□□□□ 0.84
Trim62Q80V85 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim62Q80V85 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Trim62Q80V85 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim62Q80V85 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim62Q80V85 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Trim62Q80V85 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim62Q80V85 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC20.28■□□□□ 0.84
Trim62Q80V85 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Trim62Q80V85 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim62Q80V85 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Trim62Q80V85 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim62Q80V85 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC20.28■□□□□ 0.84
Trim62Q80V85 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trim62Q80V85 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trim62Q80V85 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trim62Q80V85 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Trim62Q80V85 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Trim62Q80V85 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC20.27■□□□□ 0.84
Trim62Q80V85 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trim62Q80V85 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC20.27■□□□□ 0.84
Trim62Q80V85 Gm40848-201ENSMUST00000221998 324 ntBASIC20.27■□□□□ 0.84
Trim62Q80V85 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trim62Q80V85 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Trim62Q80V85 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms