Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC20.44■□□□□ 0.86
Prpf38bQ80SY5 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Prpf38bQ80SY5 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Prpf38bQ80SY5 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC20.43■□□□□ 0.86
Prpf38bQ80SY5 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Prpf38bQ80SY5 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC20.43■□□□□ 0.86
Prpf38bQ80SY5 Gm8520-201ENSMUST00000186517 868 ntBASIC20.43■□□□□ 0.86
Prpf38bQ80SY5 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC20.43■□□□□ 0.86
Prpf38bQ80SY5 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC20.43■□□□□ 0.86
Prpf38bQ80SY5 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Prpf38bQ80SY5 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Prpf38bQ80SY5 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC20.43■□□□□ 0.86
Prpf38bQ80SY5 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Prpf38bQ80SY5 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Prpf38bQ80SY5 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Prpf38bQ80SY5 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Prpf38bQ80SY5 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Prpf38bQ80SY5 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Prpf38bQ80SY5 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Prpf38bQ80SY5 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Prpf38bQ80SY5 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Prpf38bQ80SY5 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC20.42■□□□□ 0.86
Prpf38bQ80SY5 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC20.42■□□□□ 0.86
Prpf38bQ80SY5 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Prpf38bQ80SY5 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC20.42■□□□□ 0.86
Prpf38bQ80SY5 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Prpf38bQ80SY5 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Prpf38bQ80SY5 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Prpf38bQ80SY5 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
Prpf38bQ80SY5 AC158538.1-201ENSMUST00000225870 294 ntBASIC20.41■□□□□ 0.86
Prpf38bQ80SY5 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC20.41■□□□□ 0.86
Prpf38bQ80SY5 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Prpf38bQ80SY5 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Prpf38bQ80SY5 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Prpf38bQ80SY5 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Prpf38bQ80SY5 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Prpf38bQ80SY5 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Prpf38bQ80SY5 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Prpf38bQ80SY5 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC20.4■□□□□ 0.86
Prpf38bQ80SY5 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Prpf38bQ80SY5 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC20.4■□□□□ 0.86
Prpf38bQ80SY5 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Prpf38bQ80SY5 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Prpf38bQ80SY5 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Prpf38bQ80SY5 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Prpf38bQ80SY5 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Prpf38bQ80SY5 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Prpf38bQ80SY5 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Prpf38bQ80SY5 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Prpf38bQ80SY5 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Prpf38bQ80SY5 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Prpf38bQ80SY5 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Prpf38bQ80SY5 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Prpf38bQ80SY5 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Prpf38bQ80SY5 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Prpf38bQ80SY5 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Prpf38bQ80SY5 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Prpf38bQ80SY5 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Prpf38bQ80SY5 Gm27801-201ENSMUST00000184174 223 ntBASIC20.38■□□□□ 0.85
Prpf38bQ80SY5 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Prpf38bQ80SY5 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Prpf38bQ80SY5 Gm5112-201ENSMUST00000204407 2368 ntBASIC20.38■□□□□ 0.85
Prpf38bQ80SY5 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Prpf38bQ80SY5 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Prpf38bQ80SY5 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Prpf38bQ80SY5 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Prpf38bQ80SY5 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Prpf38bQ80SY5 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Prpf38bQ80SY5 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC20.37■□□□□ 0.85
Prpf38bQ80SY5 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC20.37■□□□□ 0.85
Prpf38bQ80SY5 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Prpf38bQ80SY5 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Prpf38bQ80SY5 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.37■□□□□ 0.85
Prpf38bQ80SY5 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Prpf38bQ80SY5 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
Prpf38bQ80SY5 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC20.37■□□□□ 0.85
Prpf38bQ80SY5 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC20.37■□□□□ 0.85
Prpf38bQ80SY5 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Prpf38bQ80SY5 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Prpf38bQ80SY5 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Prpf38bQ80SY5 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Prpf38bQ80SY5 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC20.36■□□□□ 0.85
Prpf38bQ80SY5 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC20.36■□□□□ 0.85
Prpf38bQ80SY5 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Prpf38bQ80SY5 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Prpf38bQ80SY5 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Prpf38bQ80SY5 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Prpf38bQ80SY5 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Prpf38bQ80SY5 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Prpf38bQ80SY5 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Prpf38bQ80SY5 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Prpf38bQ80SY5 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Prpf38bQ80SY5 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Prpf38bQ80SY5 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Prpf38bQ80SY5 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Prpf38bQ80SY5 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Prpf38bQ80SY5 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Prpf38bQ80SY5 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Prpf38bQ80SY5 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Prpf38bQ80SY5 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms