Protein–RNA interactions for Protein: Q6ZWS4

Cnih3, Protein cornichon homolog 3, mousemouse

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnih3Q6ZWS4 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cnih3Q6ZWS4 AC126028.2-201ENSMUST00000228100 1833 ntBASIC18.03■□□□□ 0.48
Cnih3Q6ZWS4 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cnih3Q6ZWS4 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC18.03■□□□□ 0.48
Cnih3Q6ZWS4 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cnih3Q6ZWS4 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Cnih3Q6ZWS4 Gm11175-201ENSMUST00000116172 543 ntBASIC18.03■□□□□ 0.48
Cnih3Q6ZWS4 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cnih3Q6ZWS4 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cnih3Q6ZWS4 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cnih3Q6ZWS4 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Cnih3Q6ZWS4 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cnih3Q6ZWS4 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cnih3Q6ZWS4 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cnih3Q6ZWS4 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cnih3Q6ZWS4 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cnih3Q6ZWS4 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cnih3Q6ZWS4 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cnih3Q6ZWS4 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
Cnih3Q6ZWS4 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cnih3Q6ZWS4 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC18.02■□□□□ 0.48
Cnih3Q6ZWS4 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC18.02■□□□□ 0.48
Cnih3Q6ZWS4 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cnih3Q6ZWS4 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Cnih3Q6ZWS4 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
Cnih3Q6ZWS4 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Cnih3Q6ZWS4 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
Cnih3Q6ZWS4 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Cnih3Q6ZWS4 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Cnih3Q6ZWS4 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Cnih3Q6ZWS4 Rarb-207ENSMUST00000225921 2756 ntBASIC18.02■□□□□ 0.47
Cnih3Q6ZWS4 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cnih3Q6ZWS4 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cnih3Q6ZWS4 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cnih3Q6ZWS4 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Cnih3Q6ZWS4 Gm38342-201ENSMUST00000195710 2980 ntBASIC18.01■□□□□ 0.47
Cnih3Q6ZWS4 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cnih3Q6ZWS4 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC18.01■□□□□ 0.47
Cnih3Q6ZWS4 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cnih3Q6ZWS4 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cnih3Q6ZWS4 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cnih3Q6ZWS4 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC18■□□□□ 0.47
Cnih3Q6ZWS4 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cnih3Q6ZWS4 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Cnih3Q6ZWS4 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cnih3Q6ZWS4 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC18■□□□□ 0.47
Cnih3Q6ZWS4 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC18■□□□□ 0.47
Cnih3Q6ZWS4 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Cnih3Q6ZWS4 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
Cnih3Q6ZWS4 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC18■□□□□ 0.47
Cnih3Q6ZWS4 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Cnih3Q6ZWS4 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC18■□□□□ 0.47
Cnih3Q6ZWS4 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cnih3Q6ZWS4 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cnih3Q6ZWS4 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC17.99■□□□□ 0.47
Cnih3Q6ZWS4 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cnih3Q6ZWS4 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cnih3Q6ZWS4 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cnih3Q6ZWS4 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cnih3Q6ZWS4 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cnih3Q6ZWS4 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Cnih3Q6ZWS4 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Cnih3Q6ZWS4 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cnih3Q6ZWS4 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Cnih3Q6ZWS4 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cnih3Q6ZWS4 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cnih3Q6ZWS4 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
Cnih3Q6ZWS4 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cnih3Q6ZWS4 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cnih3Q6ZWS4 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cnih3Q6ZWS4 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Cnih3Q6ZWS4 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Cnih3Q6ZWS4 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cnih3Q6ZWS4 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cnih3Q6ZWS4 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cnih3Q6ZWS4 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cnih3Q6ZWS4 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cnih3Q6ZWS4 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cnih3Q6ZWS4 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cnih3Q6ZWS4 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Cnih3Q6ZWS4 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC17.98■□□□□ 0.47
Cnih3Q6ZWS4 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cnih3Q6ZWS4 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC17.98■□□□□ 0.47
Cnih3Q6ZWS4 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Cnih3Q6ZWS4 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Cnih3Q6ZWS4 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Cnih3Q6ZWS4 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cnih3Q6ZWS4 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cnih3Q6ZWS4 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Cnih3Q6ZWS4 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC17.97■□□□□ 0.47
Cnih3Q6ZWS4 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cnih3Q6ZWS4 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Cnih3Q6ZWS4 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Cnih3Q6ZWS4 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC17.97■□□□□ 0.47
Cnih3Q6ZWS4 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC17.97■□□□□ 0.47
Cnih3Q6ZWS4 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Cnih3Q6ZWS4 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cnih3Q6ZWS4 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cnih3Q6ZWS4 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cnih3Q6ZWS4 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms