Protein–RNA interactions for Protein: Q6QIY3

Scn10a, Sodium channel protein type 10 subunit alpha, mousemouse

Predictions only

Length 1,958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn10aQ6QIY3 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Scn10aQ6QIY3 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC22.73■■□□□ 1.23
Scn10aQ6QIY3 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Scn10aQ6QIY3 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC22.73■■□□□ 1.23
Scn10aQ6QIY3 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Scn10aQ6QIY3 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Scn10aQ6QIY3 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Scn10aQ6QIY3 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Scn10aQ6QIY3 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC22.72■■□□□ 1.23
Scn10aQ6QIY3 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Scn10aQ6QIY3 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC22.72■■□□□ 1.23
Scn10aQ6QIY3 Mir7071-201ENSMUST00000184847 69 ntBASIC22.72■■□□□ 1.23
Scn10aQ6QIY3 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Scn10aQ6QIY3 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
Scn10aQ6QIY3 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Scn10aQ6QIY3 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Scn10aQ6QIY3 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC22.71■■□□□ 1.23
Scn10aQ6QIY3 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC22.71■■□□□ 1.23
Scn10aQ6QIY3 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC22.71■■□□□ 1.23
Scn10aQ6QIY3 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Scn10aQ6QIY3 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Scn10aQ6QIY3 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC22.7■■□□□ 1.23
Scn10aQ6QIY3 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.23
Scn10aQ6QIY3 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.23
Scn10aQ6QIY3 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC22.7■■□□□ 1.23
Scn10aQ6QIY3 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC22.7■■□□□ 1.23
Scn10aQ6QIY3 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC22.7■■□□□ 1.22
Scn10aQ6QIY3 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Scn10aQ6QIY3 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC22.7■■□□□ 1.22
Scn10aQ6QIY3 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
Scn10aQ6QIY3 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
Scn10aQ6QIY3 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Scn10aQ6QIY3 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Scn10aQ6QIY3 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC22.7■■□□□ 1.22
Scn10aQ6QIY3 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
Scn10aQ6QIY3 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Scn10aQ6QIY3 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC22.69■■□□□ 1.22
Scn10aQ6QIY3 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Scn10aQ6QIY3 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Scn10aQ6QIY3 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC22.69■■□□□ 1.22
Scn10aQ6QIY3 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
Scn10aQ6QIY3 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Scn10aQ6QIY3 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC22.69■■□□□ 1.22
Scn10aQ6QIY3 Trmt13-210ENSMUST00000198454 880 ntBASIC22.69■■□□□ 1.22
Scn10aQ6QIY3 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC22.68■■□□□ 1.22
Scn10aQ6QIY3 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC22.68■■□□□ 1.22
Scn10aQ6QIY3 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Scn10aQ6QIY3 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Scn10aQ6QIY3 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Scn10aQ6QIY3 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Scn10aQ6QIY3 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Scn10aQ6QIY3 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC22.67■■□□□ 1.22
Scn10aQ6QIY3 Gm44878-201ENSMUST00000205812 1295 ntBASIC22.67■■□□□ 1.22
Scn10aQ6QIY3 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC22.67■■□□□ 1.22
Scn10aQ6QIY3 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC22.67■■□□□ 1.22
Scn10aQ6QIY3 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Scn10aQ6QIY3 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
Scn10aQ6QIY3 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Scn10aQ6QIY3 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Scn10aQ6QIY3 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
Scn10aQ6QIY3 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Scn10aQ6QIY3 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Scn10aQ6QIY3 AC154266.1-201ENSMUST00000223190 503 ntBASIC22.66■■□□□ 1.22
Scn10aQ6QIY3 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Scn10aQ6QIY3 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Scn10aQ6QIY3 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC22.65■■□□□ 1.22
Scn10aQ6QIY3 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Scn10aQ6QIY3 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Scn10aQ6QIY3 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
Scn10aQ6QIY3 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
Scn10aQ6QIY3 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC22.65■■□□□ 1.22
Scn10aQ6QIY3 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC22.65■■□□□ 1.22
Scn10aQ6QIY3 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
Scn10aQ6QIY3 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Scn10aQ6QIY3 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Scn10aQ6QIY3 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.22
Scn10aQ6QIY3 Gm10812-201ENSMUST00000099864 546 ntBASIC22.64■■□□□ 1.21
Scn10aQ6QIY3 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Scn10aQ6QIY3 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.21
Scn10aQ6QIY3 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Scn10aQ6QIY3 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.21
Scn10aQ6QIY3 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC22.64■■□□□ 1.21
Scn10aQ6QIY3 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
Scn10aQ6QIY3 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
Scn10aQ6QIY3 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
Scn10aQ6QIY3 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
Scn10aQ6QIY3 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
Scn10aQ6QIY3 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC22.63■■□□□ 1.21
Scn10aQ6QIY3 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
Scn10aQ6QIY3 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC22.63■■□□□ 1.21
Scn10aQ6QIY3 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Scn10aQ6QIY3 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Scn10aQ6QIY3 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Scn10aQ6QIY3 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Scn10aQ6QIY3 Gm29241-201ENSMUST00000189260 1096 ntBASIC22.61■■□□□ 1.21
Scn10aQ6QIY3 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC22.61■■□□□ 1.21
Scn10aQ6QIY3 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Scn10aQ6QIY3 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
Scn10aQ6QIY3 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC22.61■■□□□ 1.21
Scn10aQ6QIY3 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms