Protein–RNA interactions for Protein: Q6PIP5

Nudcd1, NudC domain-containing protein 1, mousemouse

Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd1Q6PIP5 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nudcd1Q6PIP5 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Nudcd1Q6PIP5 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Nudcd1Q6PIP5 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Nudcd1Q6PIP5 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC19.77■□□□□ 0.76
Nudcd1Q6PIP5 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC19.77■□□□□ 0.76
Nudcd1Q6PIP5 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Nudcd1Q6PIP5 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19.77■□□□□ 0.76
Nudcd1Q6PIP5 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Nudcd1Q6PIP5 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
Nudcd1Q6PIP5 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Nudcd1Q6PIP5 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Nudcd1Q6PIP5 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.75
Nudcd1Q6PIP5 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.75
Nudcd1Q6PIP5 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Nudcd1Q6PIP5 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Nudcd1Q6PIP5 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nudcd1Q6PIP5 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nudcd1Q6PIP5 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nudcd1Q6PIP5 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Nudcd1Q6PIP5 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Nudcd1Q6PIP5 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nudcd1Q6PIP5 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
Nudcd1Q6PIP5 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Nudcd1Q6PIP5 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC19.76■□□□□ 0.75
Nudcd1Q6PIP5 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nudcd1Q6PIP5 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nudcd1Q6PIP5 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nudcd1Q6PIP5 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC19.75■□□□□ 0.75
Nudcd1Q6PIP5 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nudcd1Q6PIP5 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC19.75■□□□□ 0.75
Nudcd1Q6PIP5 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nudcd1Q6PIP5 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nudcd1Q6PIP5 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nudcd1Q6PIP5 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nudcd1Q6PIP5 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC19.75■□□□□ 0.75
Nudcd1Q6PIP5 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nudcd1Q6PIP5 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Nudcd1Q6PIP5 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nudcd1Q6PIP5 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Nudcd1Q6PIP5 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nudcd1Q6PIP5 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nudcd1Q6PIP5 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nudcd1Q6PIP5 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Nudcd1Q6PIP5 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC19.74■□□□□ 0.75
Nudcd1Q6PIP5 AC164629.5-201ENSMUST00000220387 632 ntBASIC19.74■□□□□ 0.75
Nudcd1Q6PIP5 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Nudcd1Q6PIP5 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nudcd1Q6PIP5 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Nudcd1Q6PIP5 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nudcd1Q6PIP5 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
Nudcd1Q6PIP5 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nudcd1Q6PIP5 Gm42642-201ENSMUST00000200683 355 ntBASIC19.73■□□□□ 0.75
Nudcd1Q6PIP5 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC19.73■□□□□ 0.75
Nudcd1Q6PIP5 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Nudcd1Q6PIP5 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nudcd1Q6PIP5 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nudcd1Q6PIP5 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC19.72■□□□□ 0.75
Nudcd1Q6PIP5 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Nudcd1Q6PIP5 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nudcd1Q6PIP5 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nudcd1Q6PIP5 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nudcd1Q6PIP5 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nudcd1Q6PIP5 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nudcd1Q6PIP5 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nudcd1Q6PIP5 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nudcd1Q6PIP5 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nudcd1Q6PIP5 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Nudcd1Q6PIP5 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nudcd1Q6PIP5 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nudcd1Q6PIP5 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC19.71■□□□□ 0.75
Nudcd1Q6PIP5 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nudcd1Q6PIP5 Gm26571-201ENSMUST00000181399 666 ntBASIC19.71■□□□□ 0.75
Nudcd1Q6PIP5 Gm27405-201ENSMUST00000184201 112 ntBASIC19.71■□□□□ 0.75
Nudcd1Q6PIP5 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nudcd1Q6PIP5 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Nudcd1Q6PIP5 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nudcd1Q6PIP5 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Nudcd1Q6PIP5 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Nudcd1Q6PIP5 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nudcd1Q6PIP5 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nudcd1Q6PIP5 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Nudcd1Q6PIP5 Gm10571-201ENSMUST00000097869 1638 ntBASIC19.7■□□□□ 0.74
Nudcd1Q6PIP5 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Nudcd1Q6PIP5 Gm14281-201ENSMUST00000121700 1294 ntBASIC19.7■□□□□ 0.74
Nudcd1Q6PIP5 Gm7291-201ENSMUST00000199147 382 ntBASIC19.7■□□□□ 0.74
Nudcd1Q6PIP5 Gm10033-202ENSMUST00000211874 928 ntBASIC19.7■□□□□ 0.74
Nudcd1Q6PIP5 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nudcd1Q6PIP5 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nudcd1Q6PIP5 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Nudcd1Q6PIP5 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Nudcd1Q6PIP5 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nudcd1Q6PIP5 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nudcd1Q6PIP5 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nudcd1Q6PIP5 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nudcd1Q6PIP5 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Nudcd1Q6PIP5 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Nudcd1Q6PIP5 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nudcd1Q6PIP5 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Nudcd1Q6PIP5 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms