Protein–RNA interactions for Protein: Q6PGB8

Smarca1, Probable global transcription activator SNF2L1, mousemouse

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca1Q6PGB8 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Smarca1Q6PGB8 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Smarca1Q6PGB8 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC21.88■■□□□ 1.09
Smarca1Q6PGB8 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Smarca1Q6PGB8 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Smarca1Q6PGB8 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
Smarca1Q6PGB8 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Smarca1Q6PGB8 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
Smarca1Q6PGB8 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
Smarca1Q6PGB8 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
Smarca1Q6PGB8 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Smarca1Q6PGB8 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
Smarca1Q6PGB8 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Smarca1Q6PGB8 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Smarca1Q6PGB8 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Smarca1Q6PGB8 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC21.87■■□□□ 1.09
Smarca1Q6PGB8 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC21.87■■□□□ 1.09
Smarca1Q6PGB8 Gm21168-201ENSMUST00000199646 1096 ntBASIC21.87■■□□□ 1.09
Smarca1Q6PGB8 Gm43173-201ENSMUST00000202246 593 ntBASIC21.87■■□□□ 1.09
Smarca1Q6PGB8 Gm2011-201ENSMUST00000203124 1263 ntBASIC21.87■■□□□ 1.09
Smarca1Q6PGB8 Spcs1-204ENSMUST00000226782 949 ntBASIC21.87■■□□□ 1.09
Smarca1Q6PGB8 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Smarca1Q6PGB8 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC21.87■■□□□ 1.09
Smarca1Q6PGB8 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Smarca1Q6PGB8 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Smarca1Q6PGB8 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Smarca1Q6PGB8 Gm12251-201ENSMUST00000117893 792 ntBASIC21.86■■□□□ 1.09
Smarca1Q6PGB8 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC21.86■■□□□ 1.09
Smarca1Q6PGB8 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Smarca1Q6PGB8 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Smarca1Q6PGB8 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
Smarca1Q6PGB8 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
Smarca1Q6PGB8 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
Smarca1Q6PGB8 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC21.86■■□□□ 1.09
Smarca1Q6PGB8 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
Smarca1Q6PGB8 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Smarca1Q6PGB8 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Smarca1Q6PGB8 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
Smarca1Q6PGB8 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Smarca1Q6PGB8 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Smarca1Q6PGB8 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Smarca1Q6PGB8 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
Smarca1Q6PGB8 Gm43017-201ENSMUST00000198296 752 ntBASIC21.85■■□□□ 1.09
Smarca1Q6PGB8 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Smarca1Q6PGB8 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Smarca1Q6PGB8 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Smarca1Q6PGB8 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Smarca1Q6PGB8 Gm6085-201ENSMUST00000182774 1470 ntBASIC21.84■■□□□ 1.09
Smarca1Q6PGB8 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Smarca1Q6PGB8 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Smarca1Q6PGB8 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
Smarca1Q6PGB8 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Smarca1Q6PGB8 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Smarca1Q6PGB8 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Smarca1Q6PGB8 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Smarca1Q6PGB8 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Smarca1Q6PGB8 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Smarca1Q6PGB8 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Smarca1Q6PGB8 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC21.83■■□□□ 1.09
Smarca1Q6PGB8 Gm27045-201ENSMUST00000182145 1402 ntBASIC21.83■■□□□ 1.09
Smarca1Q6PGB8 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Smarca1Q6PGB8 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
Smarca1Q6PGB8 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
Smarca1Q6PGB8 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Smarca1Q6PGB8 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
Smarca1Q6PGB8 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Smarca1Q6PGB8 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Smarca1Q6PGB8 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Smarca1Q6PGB8 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC21.82■■□□□ 1.08
Smarca1Q6PGB8 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Smarca1Q6PGB8 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
Smarca1Q6PGB8 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Smarca1Q6PGB8 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Smarca1Q6PGB8 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC21.82■■□□□ 1.08
Smarca1Q6PGB8 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC21.82■■□□□ 1.08
Smarca1Q6PGB8 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Smarca1Q6PGB8 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Smarca1Q6PGB8 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Smarca1Q6PGB8 AC124392.1-201ENSMUST00000225172 5324 ntBASIC21.81■■□□□ 1.08
Smarca1Q6PGB8 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC21.81■■□□□ 1.08
Smarca1Q6PGB8 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC21.81■■□□□ 1.08
Smarca1Q6PGB8 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Smarca1Q6PGB8 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
Smarca1Q6PGB8 Gm10209-201ENSMUST00000203397 1607 ntBASIC21.8■■□□□ 1.08
Smarca1Q6PGB8 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
Smarca1Q6PGB8 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Smarca1Q6PGB8 Gm6802-201ENSMUST00000167843 1983 ntBASIC21.8■■□□□ 1.08
Smarca1Q6PGB8 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
Smarca1Q6PGB8 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
Smarca1Q6PGB8 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Smarca1Q6PGB8 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC21.8■■□□□ 1.08
Smarca1Q6PGB8 Mir6236-201ENSMUST00000184437 123 ntBASIC21.8■■□□□ 1.08
Smarca1Q6PGB8 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
Smarca1Q6PGB8 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Smarca1Q6PGB8 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Smarca1Q6PGB8 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC21.8■■□□□ 1.08
Smarca1Q6PGB8 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Smarca1Q6PGB8 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Smarca1Q6PGB8 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Smarca1Q6PGB8 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms