Protein–RNA interactions for Protein: Q6PE54

Dhx40, Probable ATP-dependent RNA helicase DHX40, mousemouse

Known RBP Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dhx40Q6PE54 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
Dhx40Q6PE54 Gm42501-201ENSMUST00000200220 1026 ntBASIC21.82■■□□□ 1.08
Dhx40Q6PE54 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Dhx40Q6PE54 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Dhx40Q6PE54 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Dhx40Q6PE54 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Dhx40Q6PE54 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Dhx40Q6PE54 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Dhx40Q6PE54 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Dhx40Q6PE54 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Dhx40Q6PE54 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
Dhx40Q6PE54 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Dhx40Q6PE54 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Dhx40Q6PE54 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Dhx40Q6PE54 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Dhx40Q6PE54 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC21.81■■□□□ 1.08
Dhx40Q6PE54 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Dhx40Q6PE54 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Dhx40Q6PE54 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Dhx40Q6PE54 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
Dhx40Q6PE54 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Dhx40Q6PE54 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Dhx40Q6PE54 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC21.81■■□□□ 1.08
Dhx40Q6PE54 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC21.81■■□□□ 1.08
Dhx40Q6PE54 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC21.81■■□□□ 1.08
Dhx40Q6PE54 Rps24-207ENSMUST00000224568 714 ntBASIC21.81■■□□□ 1.08
Dhx40Q6PE54 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC21.81■■□□□ 1.08
Dhx40Q6PE54 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
Dhx40Q6PE54 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Dhx40Q6PE54 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Dhx40Q6PE54 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Dhx40Q6PE54 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
Dhx40Q6PE54 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
Dhx40Q6PE54 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Dhx40Q6PE54 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Dhx40Q6PE54 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC21.8■■□□□ 1.08
Dhx40Q6PE54 Gm43231-201ENSMUST00000202960 2258 ntBASIC21.8■■□□□ 1.08
Dhx40Q6PE54 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Dhx40Q6PE54 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC21.79■■□□□ 1.08
Dhx40Q6PE54 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
Dhx40Q6PE54 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Dhx40Q6PE54 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC21.79■■□□□ 1.08
Dhx40Q6PE54 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC21.79■■□□□ 1.08
Dhx40Q6PE54 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Dhx40Q6PE54 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Dhx40Q6PE54 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Dhx40Q6PE54 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC21.79■■□□□ 1.08
Dhx40Q6PE54 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Dhx40Q6PE54 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Dhx40Q6PE54 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Dhx40Q6PE54 Gm10657-201ENSMUST00000193528 1031 ntBASIC21.78■■□□□ 1.08
Dhx40Q6PE54 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Dhx40Q6PE54 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
Dhx40Q6PE54 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Dhx40Q6PE54 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Dhx40Q6PE54 AC126028.2-201ENSMUST00000228100 1833 ntBASIC21.78■■□□□ 1.08
Dhx40Q6PE54 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Dhx40Q6PE54 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
Dhx40Q6PE54 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Dhx40Q6PE54 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Dhx40Q6PE54 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
Dhx40Q6PE54 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC21.77■■□□□ 1.08
Dhx40Q6PE54 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC21.77■■□□□ 1.08
Dhx40Q6PE54 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Dhx40Q6PE54 Gm9870-201ENSMUST00000063874 645 ntBASIC21.77■■□□□ 1.08
Dhx40Q6PE54 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Dhx40Q6PE54 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC21.77■■□□□ 1.08
Dhx40Q6PE54 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Dhx40Q6PE54 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.07
Dhx40Q6PE54 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC21.77■■□□□ 1.07
Dhx40Q6PE54 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
Dhx40Q6PE54 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Dhx40Q6PE54 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC21.76■■□□□ 1.07
Dhx40Q6PE54 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Dhx40Q6PE54 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Dhx40Q6PE54 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Dhx40Q6PE54 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC21.76■■□□□ 1.07
Dhx40Q6PE54 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC21.76■■□□□ 1.07
Dhx40Q6PE54 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Dhx40Q6PE54 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Dhx40Q6PE54 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC21.76■■□□□ 1.07
Dhx40Q6PE54 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC21.76■■□□□ 1.07
Dhx40Q6PE54 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Dhx40Q6PE54 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Dhx40Q6PE54 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
Dhx40Q6PE54 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Dhx40Q6PE54 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Dhx40Q6PE54 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Dhx40Q6PE54 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Dhx40Q6PE54 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Dhx40Q6PE54 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Dhx40Q6PE54 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Dhx40Q6PE54 Gm14117-201ENSMUST00000122417 843 ntBASIC21.75■■□□□ 1.07
Dhx40Q6PE54 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Dhx40Q6PE54 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Dhx40Q6PE54 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC21.74■■□□□ 1.07
Dhx40Q6PE54 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Dhx40Q6PE54 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Dhx40Q6PE54 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Dhx40Q6PE54 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms