Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Smarcd3Q6P9Z1 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Smarcd3Q6P9Z1 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Smarcd3Q6P9Z1 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Smarcd3Q6P9Z1 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Smarcd3Q6P9Z1 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Smarcd3Q6P9Z1 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
Smarcd3Q6P9Z1 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Smarcd3Q6P9Z1 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Smarcd3Q6P9Z1 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Smarcd3Q6P9Z1 Hsf1-204ENSMUST00000226872 2104 ntBASIC17.95■□□□□ 0.46
Smarcd3Q6P9Z1 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Smarcd3Q6P9Z1 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Smarcd3Q6P9Z1 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Smarcd3Q6P9Z1 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Smarcd3Q6P9Z1 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Smarcd3Q6P9Z1 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Smarcd3Q6P9Z1 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.95■□□□□ 0.46
Smarcd3Q6P9Z1 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Smarcd3Q6P9Z1 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Smarcd3Q6P9Z1 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC17.95■□□□□ 0.46
Smarcd3Q6P9Z1 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Smarcd3Q6P9Z1 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Smarcd3Q6P9Z1 Gm9870-201ENSMUST00000063874 645 ntBASIC17.94■□□□□ 0.46
Smarcd3Q6P9Z1 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Smarcd3Q6P9Z1 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Smarcd3Q6P9Z1 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Smarcd3Q6P9Z1 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Smarcd3Q6P9Z1 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Smarcd3Q6P9Z1 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Smarcd3Q6P9Z1 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Smarcd3Q6P9Z1 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Smarcd3Q6P9Z1 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Smarcd3Q6P9Z1 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Smarcd3Q6P9Z1 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC17.93■□□□□ 0.46
Smarcd3Q6P9Z1 Gm43530-201ENSMUST00000195920 274 ntBASIC17.93■□□□□ 0.46
Smarcd3Q6P9Z1 Gm15820-201ENSMUST00000201566 728 ntBASIC17.93■□□□□ 0.46
Smarcd3Q6P9Z1 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Smarcd3Q6P9Z1 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Smarcd3Q6P9Z1 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Smarcd3Q6P9Z1 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Smarcd3Q6P9Z1 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Smarcd3Q6P9Z1 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Smarcd3Q6P9Z1 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Smarcd3Q6P9Z1 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Smarcd3Q6P9Z1 Gm6802-201ENSMUST00000167843 1983 ntBASIC17.92■□□□□ 0.46
Smarcd3Q6P9Z1 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Smarcd3Q6P9Z1 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Smarcd3Q6P9Z1 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC17.92■□□□□ 0.46
Smarcd3Q6P9Z1 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC17.92■□□□□ 0.46
Smarcd3Q6P9Z1 Gm42501-201ENSMUST00000200220 1026 ntBASIC17.92■□□□□ 0.46
Smarcd3Q6P9Z1 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Smarcd3Q6P9Z1 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.92■□□□□ 0.46
Smarcd3Q6P9Z1 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Smarcd3Q6P9Z1 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Smarcd3Q6P9Z1 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Smarcd3Q6P9Z1 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Smarcd3Q6P9Z1 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Smarcd3Q6P9Z1 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Smarcd3Q6P9Z1 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC17.91■□□□□ 0.46
Smarcd3Q6P9Z1 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC17.91■□□□□ 0.46
Smarcd3Q6P9Z1 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC17.91■□□□□ 0.46
Smarcd3Q6P9Z1 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Smarcd3Q6P9Z1 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Smarcd3Q6P9Z1 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Smarcd3Q6P9Z1 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Smarcd3Q6P9Z1 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Smarcd3Q6P9Z1 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Smarcd3Q6P9Z1 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Smarcd3Q6P9Z1 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Smarcd3Q6P9Z1 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Smarcd3Q6P9Z1 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC17.89■□□□□ 0.46
Smarcd3Q6P9Z1 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
Smarcd3Q6P9Z1 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Smarcd3Q6P9Z1 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Smarcd3Q6P9Z1 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Smarcd3Q6P9Z1 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Smarcd3Q6P9Z1 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Smarcd3Q6P9Z1 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Smarcd3Q6P9Z1 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Smarcd3Q6P9Z1 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Smarcd3Q6P9Z1 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Smarcd3Q6P9Z1 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Smarcd3Q6P9Z1 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC17.88■□□□□ 0.45
Smarcd3Q6P9Z1 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC17.88■□□□□ 0.45
Smarcd3Q6P9Z1 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Smarcd3Q6P9Z1 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Smarcd3Q6P9Z1 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC17.88■□□□□ 0.45
Smarcd3Q6P9Z1 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
Smarcd3Q6P9Z1 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Smarcd3Q6P9Z1 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Smarcd3Q6P9Z1 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Smarcd3Q6P9Z1 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Smarcd3Q6P9Z1 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Smarcd3Q6P9Z1 Gm5522-201ENSMUST00000189483 1242 ntBASIC17.88■□□□□ 0.45
Smarcd3Q6P9Z1 Gm7417-201ENSMUST00000192950 473 ntBASIC17.88■□□□□ 0.45
Smarcd3Q6P9Z1 Gm10657-201ENSMUST00000193528 1031 ntBASIC17.88■□□□□ 0.45
Smarcd3Q6P9Z1 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Smarcd3Q6P9Z1 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Smarcd3Q6P9Z1 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms